Sciurus carolinensis (gray squirrel): 124986929
Help
Entry
124986929 CDS
T08117
Name
(RefSeq) protocadherin beta-5-like
KO
K16494
protocadherin beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124986929
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Protocadherins
124986929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
124986929
NCBI-ProteinID:
XP_047411716
LinkDB
All DBs
Position
6:99457742..99460803
Genome browser
AA seq
795 aa
AA seq
DB search
METALGKPPQRGQVILLVMLLFLWEADSEAIRYSVPEETESGYSVANLAKDLGLRVGELA
TRGARIHHKGSKQLLQLDVKTGDLLLQGKLDREVLCGAVEPCILHFQLLLEHPVQLFQVD
VQLTDVNDHSPEFLDREMMLRIPESVQPGTVFALKSAQDLDMGSNSVQNYTISPNSNFRV
VTHNRGDGRKYPELVLGKALDREEQPELILTLTALDGGVPPRSGTVTVRIEVVDINDNAP
EFLQSVYEVQVPENSPINSLVLIVSARDLDAGTYGSVAYSLFEADEVSEPFAIHEKTGEI
RLQKALDFEATQHYIVEIAATDGGGLVGKCTVAIEVVDVNDNAPELTMSMVRSSIPENSP
ETIVAIFSVSDPDSGDNGKMVCSIQNDLPFLLKPTFKNFYTLVTEGPLDRESRAQYNITI
TVTDLGTPRLETEHSITVLVSDVNDNAPTFSQTSYTLSVRENNSPALHIGSVSATDRDSG
SNAQLTYSLLPPQDPHLPLASLVSINADNGQLFALRALDFEALQAFEFRVGATDRGSPAL
SSQALVRVVVLDDNDNSPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW
LSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPLPEVAPERAQADSLTVYLVIALASVSSLFLFSVLVFVVVRLCRRSRAAP
LGVCSVPEGHFPSHLVDVSGTGTLSQSYQYEECLAGDSGSGEFKFLKQIFPNFLVQDSGR
EVKENSNCRNSFVFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcactaggaaaaccgccacagagagggcaagttattttacttgttatgctg
ttgtttttgtgggaggctgactctgaggcaattaggtattctgtgccagaagaaacagaa
agtggctactctgtggccaacctggcaaaagatctggggctcagggttggggagttggcc
actcggggcgcgcgaatccatcacaaaggcagcaaacagctcctgcagctcgatgtaaag
actggcgatttgcttctacagggaaaactagaccgggaggtgctttgtggggcggtagaa
ccctgtatattgcatttccaattgttattagaacacccggtgcagttgtttcaagttgat
gtgcaactcacagatgtaaatgaccattctccagaattcctggacagggaaatgatgctt
agaatcccagagagtgttcagccagggactgtgtttgctttgaaatcagctcaggacttg
gacatgggtagtaacagtgttcagaactacacgatcagccccaactccaattttcgtgtt
gttactcacaatcgtggagatggcagaaaatacccagagctggtgttgggcaaagctctg
gacagggaggaacagcctgagctcattttaaccctcacagcgctggatggtggggtgcca
cccaggtctggaaccgtcacagtacgcattgaagtggtagacatcaatgataacgcacct
gaatttttacagtccgtgtatgaagtacaggttcctgagaacagtcccataaactcgtta
gttcttattgtctctgctcgagatttagatgcaggaacatatgggagtgtagcctactct
ttattcgaagctgatgaagtttctgaaccattcgccatacacgaaaaaacgggagaaatt
cgtctgcaaaaggcattggattttgaagcaacacaacattatattgtagaaattgcagcc
acagatggtggagggcttgtagggaaatgtacagtggccatagaagtggtggatgtgaat
gacaatgctcctgaactgaccatgtctatggtcaggagctctatcccagaaaactcccct
gagactatagttgccattttcagcgtttctgatccagactccggggacaatggtaagatg
gtttgctccatacaaaacgacctccccttcctcttgaagcccacatttaagaacttttac
accctggtaacagagggccccctggacagagagagcagagcccagtacaacatcaccatc
acagtcaccgacctggggacacccaggctggaaaccgagcacagcataaccgtcctggtc
tccgacgtcaacgacaacgcccctaccttctcgcagacgtcctacacgctgtcggtgcgc
gagaacaacagccccgccctgcatataggcagcgtcagcgccacagacagagactcaggc
agcaacgcccagctgacctactcgctgctgccgccccaggacccgcacctgcccctcgcc
tcgctggtctccatcaacgcggacaacgggcagctgttcgcgctgagggcgctggacttc
gaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgaggctcgcccgcgctg
agcagccaggcgctggtgcgcgtcgtggtgctggacgacaacgacaactcgcccttcgtg
ctctacccgctgcagaacgcctctgcgccctgcaccgagctggtgcccagggcggcagag
ccgggctacctggtcaccaaggtggtggcggtggacggagactcgggccagaacgcctgg
ctgtcgttccagctgctcaaggccacggagcccgggctgtttggcgtgtgggcgcacaat
ggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaggcacaggctggtg
gtgctggtcaaggacaatggcgagccgccgctgtctgccagcgtcacgctgcacgtgctg
ctggtggatggcttctcgcagccctacctgccgctgccggaagtggcgcctgagcgcgcg
caggccgactcgctgacagtctacttggtcatcgccttggcctcggtgtcgtcgctcttc
ctcttttcggtgctggtgtttgtggtggtgaggctgtgcaggaggagcagggcggcgccg
ctgggtgtgtgctctgtgcctgagggccactttcctagccacctggtggatgttagtggc
actgggaccctgtcccagagctaccagtatgaggagtgtctggcaggagactctgggtct
ggtgagttcaaattcctgaagcagatattccccaacttcttggttcaggactctgggaga
gaagttaaggaaaattccaactgcagaaatagctttgtattcagttaa
DBGET
integrated database retrieval system
