Sciurus carolinensis (gray squirrel): 124986945
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Entry
124986945 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: peptidylprolyl isomerase domain and WD repeat-containing protein 1-like
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124986945
03110 Chaperones and folding catalysts [BR:
ncar03110
]
124986945
Enzymes [BR:
ncar01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
124986945
Spliceosome [BR:
ncar03041
]
Complex C
Other components
PPlases
124986945
Chaperones and folding catalysts [BR:
ncar03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
124986945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR19_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
PEP5_VPS11_N
DUF505
Motif
Other DBs
NCBI-GeneID:
124986945
NCBI-ProteinID:
XP_047411749
LinkDB
All DBs
Position
6:53758736..53781380
Genome browser
AA seq
646 aa
AA seq
DB search
MDAESGSDLPLKRRRRRDPEEPEKNESNARELAVAVTVAQENDEENEERWVGPLPVEATL
AKKRKVLEFERVYLDNLPSASMYERSYMHRDVITHVVCTKTDFIITASHDGHVKFWKKIE
EGIEFVKHFRSHLGVIESIAVSSEGALFCSVGDDKAMKVFDVVNFDMINMLKLGYFPGQC
EWIYCPGDAISSVAASEKSTGKIFIYDGRGDNQPLHIFDKLHTSPLTQIRLNPIYKAVVS
SDKSGMIEYWTGPPHEYKFPKNVNWDYKTDTDLYEFAKCKAYPTSICFSPDGKKIATIGS
DRKVRIFRFLTGKLMRVFDESLSMFTELQQMRQQLPDMEFGRRMAVERELEKVDAVRLIN
IVFDETGHFVLYGTMLGIKVINVETNRCVRILGKQENIRVMQLALFQGIAXKHRAATTIE
MKASENPVXQNIQADPTIVCTSFKKNRFYMFTKREPEDTKSADSDRDXFNEKPSKEEVMA
ATQAEGPKRVSDSAIIHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGF
MIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTP
WLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggaaagtggcagcgatttgccacttaaaagaagaaggcgccgggacccagaa
gagccagaaaaaaacgaatcgaacgctagagaattggcagtggcggtgacggtagcccaa
gagaacgatgaggagaatgaagagcgctgggttgggccattacctgtggaggcaacactg
gccaaaaagaggaaagttctagagtttgaaagagtctatcttgataatctccccagtgca
tccatgtacgagcgcagttatatgcatagagatgttatcacccatgtggtatgcaccaag
acagattttattattactgccagtcatgatggacacgttaaattctggaaaaaaatagaa
gagggaattgaatttgttaaacattttcgtagtcaccttggagttattgagagtattgca
gttagctctgagggagctttgttctgttctgtgggtgatgataaagcaatgaaggtgttt
gatgtagtgaactttgacatgatcaatatgctgaagcttggctattttcctggacagtgt
gaatggatctactgtccaggggatgccatatcttcagttgctgcttctgagaagagtaca
ggaaaaatttttatttatgatggtcgaggagataaccagccacttcatatttttgacaaa
cttcatacatcacctcttactcagatacggctaaacccaatttacaaagcagtagtgtct
tctgacaaatctggaatgattgagtactggactgggcctcctcatgaatataaattcccc
aaaaatgtgaactgggactataaaactgacacagatttatatgaatttgccaagtgtaag
gcttatccaaccagcatatgtttttcacccgacggaaagaaaatagcaactattggttct
gatagaaaagttagaattttcaggtttttaactggaaaactcatgagagtctttgatgaa
tcattaagtatgtttacagaactacaacagatgaggcaacagctaccagacatggaattt
ggccgaagaatggctgtagaacgtgaattggaaaaggtggatgctgtaagattaattaat
atagtttttgatgaaactggacacttcgtgctgtatggaacaatgctgggcattaaagtt
ataaatgtagagacgaaccggtgtgtgcggatcttaggcaagcaagaaaatatcagagtg
atgcaattggctttgtttcagggaatagccnaaaagcatcgtgctgcgactactatagag
atgaaagcttctgaaaaccctgttnctcagaatattcaagctgacccaacaatagtctgt
acatctttcaagaagaacagattttatatgtttaccaaacgagaaccagaagatacaaaa
agtgcagattctgaccgggatngttttaatgagaagccttccaaagaagaagtcatggca
gctactcaagctgaaggacctaaacgagtttcagatagtgccattatccacacaagcatg
ggggatattcacatcaaactttttcctgttgagtgccctaaaacagtggaaaacttctgt
gttcacagcagaaatggttattataatgggcatacatttcaccgtataatcaagggtttc
atgattcagacaggagacccaacaggtacaggtatgggaggagaaagcatatggggagga
gaatttgaagatgagtttcattcaacattgcgacatgacagaccatacacactcagtatg
gccaatgctggatcaaatactaatggatcccagtttttcataacagtagtaccaacgccg
tggcttgataataagcacacagtatttggacgtgtaactaaaggaatggaagttgtgcag
agaatctccaatgtcaaagtcaatcccaaaacagataagccttatgaggatgtcagcatt
ataaatatcactgtcaagtaa
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