Sciurus carolinensis (gray squirrel): 124986952
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Entry
124986952 CDS
T08117
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 6
KO
K08621
a disintegrin and metalloproteinase with thrombospondin motifs 6 [EC:3.4.24.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124986952
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
124986952
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP_1
ADAMTS_CR_2
Reprolysin_5
Reprolysin_3
ADAMTS_CR_3
TSP1_spondin
Reprolysin_2
PLAC
Reprolysin_4
TSP1_CCN
Peptidase_M57
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
124986952
NCBI-ProteinID:
XP_047411761
EnsemblRapid:
ENSSCRG00010012307
LinkDB
All DBs
Position
6:complement(53382130..53675253)
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AA seq
1118 aa
AA seq
DB search
MEIVWKTLTWILSLIMASSEFHSDHRLSYSSQEEFLTYLEHYQLTIPIRVDQNGAFLSFT
VKNDKHSRRRRSMDPIDPQQAVSKLFFKLSAYGKHFHLNLTLNTNFVSKHFTVEYWGKDG
PQWKHDFLDNCHYTGYLQDQHSTTKVALSNCIGLHGIIATEDEEYFIEPLKNTTEDSRHF
SYENGHPHVIYKKSTLQQRHLYDHSHCGVLDLTRSGKPWWLNDTSSAFPSLLPTNDTHIR
QRQKRSVSIERFVETLVVADKMMVGYHGRKDIEHYILSVMNIVAKLYRDSSLGNVVNIIV
ARLIVLTEDQPNLEINHHADKSLDSFCKWQKSILSHQSDGNTIPENGIAHHDNAVLITRY
DICTYKNKPCGTLGLASVAGMCEPERSCSINEDIGLGSAFTIAHEIGHNFGMNHDGIGNS
CGTKGHEAAKLMAAHITANTNPFSWSACSRDYITSFLDSGRGTCLDNEPPKRDFLYPAVA
PGQVYDADEQCRFQYGATSRQCKYGEVCRELWCLSKSNRCVTNSIPAAEGTLCQTGNIEK
GWCYQGDCVPFGTWPQSIDGGWGPWSLWGECSRTCGGGVSSSLRHCDSPAPSGGGKYCLG
ERKRYRSCNTDPCPLGSRDFREKQCADFDNMPFRGKYYNWKPYTGGGVKPCALNCLAEGY
NFYTERAPAVIDGTQCNADSLDICINGECKHVGCDNILGSDAREDRCRVCGGDGSTCDAI
EGFFNDSLPRGGYMEVVQIPRGSVHIEVREVAVSKNYIALKSEGDDYYINGAWTIDWPRK
FDVAGTAFHYKRPTDEPESLEALGPTSENLIIMVLLQEQNLGIRYKFNVPITRTGSGDNE
VGFTWNHQPWSECSATCAGGVQRQEVVCKRLDDNSIVQNNYCDPDSKPPENQRACNSEPC
PPEWFIGDWLECSKTCDGGMRTRAVLCIRKIGPSEEETLDYSGCLTHRPIEKEPCNNQSC
PPQWVALDWSECTPKCGPGFKHRIVLCKSSDLSKTFPAAQCPEESKPPVRIRCSLGRCPP
PRWVTGDWGQCSAQCGLGQQMRTVQCLSYTGQASSDCPETVRPPSMQQCESKCDSTPISN
TEECKDVNKVAYCPLVLKFKFCSRAYFRQMCCKTCQGH
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgtgtggaagacgttgacctggattttgagcctcatcatggcttcatcggaa
tttcatagtgaccacagactttcatacagttctcaagaggaattcctgacttatcttgaa
cactaccagctaactattccaataagggttgatcaaaatggagcttttctcagctttact
gtgaaaaatgataaacactcaaggagaagacggagtatggaccctattgatccacagcag
gcagtatctaagttattttttaaactttcagcctatggcaagcactttcacctaaacttg
actctcaatacaaattttgtgtccaaacattttacagtagaatattgggggaaagatgga
ccccagtggaaacatgattttttagacaactgtcattacacaggatacttgcaagatcaa
catagtacaactaaagtggctttaagcaactgtattgggttgcatggtattattgctaca
gaagatgaagaatattttattgagcctttaaagaacaccacagaggattccaggcatttt
agttatgaaaatggccatcctcatgttatttacaaaaaatctacccttcaacaacgacat
ctctatgatcactctcattgtggggttttggacctcacaagaagtggcaaaccttggtgg
ttgaacgatacatcatctgcttttccttctttactgccaactaacgacacacatatccgc
cagagacagaagagatcagtgagcattgagcggtttgtggaaacattagtagtggcagac
aaaatgatggtgggctaccacggccgcaaagatattgaacactacattttgagtgtgatg
aatattgttgccaaactttaccgtgattccagcctaggaaacgttgtgaacattatagtg
gcccgcttaattgttctcacagaagatcagccaaacttggagataaaccaccatgcagac
aagtccctcgatagcttctgtaaatggcagaaatccattctctcccaccaaagtgatgga
aacaccattccagaaaatgggattgcccaccacgataatgcagttcttattactagatat
gatatctgcacttataaaaataagccctgtggaacactgggcttggcctctgtggctgga
atgtgtgagcctgaaaggagctgcagcattaatgaagacattggcctgggttcagctttt
accattgcacatgagattggtcacaattttggtatgaaccatgacggaattggaaattct
tgtgggacgaaaggtcatgaagcagcaaaacttatggcagctcacattactgcaaatacc
aatcctttttcctggtctgcctgcagtcgagactatatcaccagctttctagattcaggc
cgtggtacttgccttgataatgagcctcccaagcgtgactttctttatccagctgtggcc
ccaggtcaggtgtacgatgctgatgagcaatgtcgtttccagtatggagcaacatctcgc
caatgtaaatatggggaagtgtgtagagagctctggtgcctcagcaaaagcaaccgctgt
gtcaccaacagtattccagcagctgaggggacactctgtcaaacagggaatattgaaaag
gggtggtgttatcagggagattgtgttccttttggcacttggccccagagcatagatggg
ggctggggtccctggtcactgtggggagagtgcagcaggacctgcgggggaggcgtctcc
tcatccctaagacactgtgacagtccagcaccttcaggaggtggaaaatattgccttggg
gaaaggaaacggtatcgctcctgtaacacagatccatgccctttgggttcccgagatttt
cgagagaaacaatgtgcagactttgacaatatgcctttccgaggaaagtattataactgg
aaaccctatactggaggaggggtaaaaccttgtgcattaaactgcttggctgaaggttac
aatttctacactgaacgtgcccctgcagtgattgatgggacccaatgcaatgcagactcc
ctggatatctgtatcaatggagaatgcaagcatgtaggttgtgataatattttgggatct
gatgctagggaagatagatgtcgagtctgcggaggggatggaagcacatgtgatgccatt
gaaggattcttcaatgactccttgcccagaggaggttatatggaagtggtgcagatacca
agagggtctgttcacattgaagtcagggaagttgccgtgtcaaagaactatattgcgcta
aaatctgaaggggacgattactatattaatggtgcttggactattgactggcccaggaag
ttcgatgttgctggaacagcttttcactataagagaccaaccgatgaacctgaatcctta
gaagctttgggtcccacctctgaaaatcttattatcatggttctgctccaggaacagaat
ttgggaattaggtataagttcaacgttcccatcactcgcactggcagtggagacaatgaa
gttggcttcacgtggaatcatcagccttggtcagaatgctcagctacttgtgctggaggt
gtccaaagacaggaggtggtctgtaaaaggttggatgacaactccattgtccagaacaat
tactgtgaccctgacagtaagccacctgaaaatcaaagagcctgcaactctgagccctgc
ccacctgagtggttcattggggattggttggagtgcagcaagacttgtgatggtgggatg
cgcacaagggcggtgctctgcatcaggaagatcggaccttctgaggaggagacactggac
tatagtggttgtttaacacaccggcctatcgaaaaagagccctgcaacaaccagtcatgt
ccacctcagtgggtggctttggactggtccgaatgtactccaaaatgtggtccaggattc
aagcatcggattgttctgtgtaagagcagtgacctttctaaaacattcccagctgcacaa
tgtccagaggaaagtaaacctcctgtccgcatccgctgcagtttgggccgctgccctcct
ccgcgctgggtgacaggagactggggccagtgttcagctcagtgtggtcttggacagcaa
atgcgaaccgtgcagtgtctctcctataccggacaggcatctagtgactgtccagaaact
gttcggcctccgtcaatgcagcagtgtgaaagcaaatgtgacagtactcccatctccaat
actgaagagtgcaaagatgtgaacaaagtggcttattgcccactggtgctgaagttcaag
ttctgcagtcgagcatacttcagacagatgtgttgtaagacctgccaaggacactga
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