KEGG   Sciurus carolinensis (gray squirrel): 124986978
Entry
124986978         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: proteasome subunit alpha type-3-like
  KO
K02727  20S proteasome subunit alpha 7 [EC:3.4.25.1]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03050  Proteasome
ncar05010  Alzheimer disease
ncar05012  Parkinson disease
ncar05014  Amyotrophic lateral sclerosis
ncar05016  Huntington disease
ncar05017  Spinocerebellar ataxia
ncar05020  Prion disease
ncar05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    124986978
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124986978
   05012 Parkinson disease
    124986978
   05014 Amyotrophic lateral sclerosis
    124986978
   05016 Huntington disease
    124986978
   05017 Spinocerebellar ataxia
    124986978
   05020 Prion disease
    124986978
   05022 Pathways of neurodegeneration - multiple diseases
    124986978
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ncar01002]
    124986978
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ncar03051]
    124986978
Enzymes [BR:ncar01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     124986978
Peptidases and inhibitors [BR:ncar01002]
 Threonine peptidases
  Family T1: proteasome family
   124986978
Proteasome [BR:ncar03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   alpha type subunits
    124986978
SSDB
Motif
Pfam: Proteasome Proteasome_A_N
Other DBs
NCBI-GeneID: 124986978
NCBI-ProteinID: XP_047411795
LinkDB
Position
6:16245958..16246766
AA seq 269 aa
MCSIGPGYXSASTFSPDGRVLQVEYAMKATENISTAVGIRYEDGVVFQVRKLVLSKLYEE
GSNKRLFNVDLHVGMTVAGLLADDHSLADIAREEASNSTSNFGYNIPLKHLADRVAIYVH
VYMLCSAVRPFGCSFVLGSYGVNDGVQLYMTDPSGVSYGYRGCAFGKARQVAKTEIEKLQ
MKETTCHDVVKEVAKIIYIVYDEVKDKTFLLELCWVGELTKGRHEIVPKDIREEAEKYAK
ESLKEQDESDDDNIYFSIYSVINFYNSPI
NT seq 810 nt   +upstreamnt  +downstreamnt
atgtgctccattggtcctgggtacncgtcagcttctacattctctcctgatggaagagtt
ttacaagttgaatatgctatgaaggctacagaaaatattagtacagctgtggggatcaga
tatgaagatggtgttgtctttcaggtacgaaaattggtgctgtctaaactttatgaagaa
ggttccaataaacgactttttaatgtcgatctgcatgttggaatgactgtagcaggtttg
ttggcagatgatcattctttagcagatatagcaagagaagaagcttccaactctacatcc
aactttggctacaacattccactaaagcatcttgcagacagagtggccatatacgtacat
gtttatatgctctgcagcgctgttagaccttttggctgcagtttcgtgttaggatcttat
ggtgtgaatgatggtgtacaactctacatgactgacccatcaggtgtttcttacggttat
cggggctgtgcctttggcaaagccaggcaagttgcaaagacagaaatagaaaaacttcag
atgaaggaaacaacctgccatgatgttgttaaagaagttgcaaaaataatttacatagta
tatgatgaagttaaggataaaacttttctactagagctctgctgggttggtgaattaact
aaaggaagacatgaaattgttccaaaagatataagggaagaagcagagaaatatgctaag
gaatctttgaaggagcaagatgaatcagatgatgataacatttacttcagcatctattct
gttataaatttctataacagtcccatataa

DBGET integrated database retrieval system