Sciurus carolinensis (gray squirrel): 124986992
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Entry
124986992 CDS
T08117
Name
(RefSeq) nuclear pore complex protein Nup155
KO
K14312
nuclear pore complex protein Nup155
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124986992
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124986992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124986992
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124986992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Paramyxo_P
Motif
Other DBs
NCBI-GeneID:
124986992
NCBI-ProteinID:
XP_047411825
LinkDB
All DBs
Position
6:complement(32041688..32102256)
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AA seq
1391 aa
AA seq
DB search
MPSSLLGAVMPASASATALQEALENAGRLIDRQLQEDRMYPDLSELLMVSAPSNPTVSGM
SDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPAISRAWLTID
SDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHIRHLLVLATPVDIVILGLSY
ANLQTGSGILNDSMSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVAY
QAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPIVQIAIDNSRNILYTRSEKGVI
QVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLLA
VTHAGIRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHKALYSKGILLM
AASENEDNDVLWCINHDTFPFQKPMMETQMTTRVDGHSWALSAIDELKVDKIITPLNKDH
IPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFK
LHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPATLPTPSNVGPILGS
PVYASSPVPSGSPYPNPSFLGTPSQGIQPPAMSTPVCSMGNPAAQATSMSCMTGPEIVYS
GKHNGICIYFSRIMGNIWDASLVVERVFKSGNREIMAIESSVPCQLLESVLQELKGLQEF
LDRNSQFAGGPLGNPNATAKVQQRLMGFMRPENGNTQQMQQELQRKFHEAQLSEKVSLQA
IQQLVRKSYQALALWKLLCEHQFTVIVGELQKEFQEQLKITTFKDLVIRDKELTGALIAS
LINCYIRDNAAVDGISLHLQDICPLLYSTDDAVCSKANELLQRSRQVQSKSEKERMLRES
LKEYQKISNQVDLSNVCTQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDMV
GLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHF
EQMLKLAQRSKDELFSIALYNWLIQADLADKLLQVASPFLEPHLVRMAKVDQNKVRYMDL
LWRYYEKNRSFSNAARVLSKLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGEF
LHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLAE
CKLGIIHCAGYSDPILVQTLWQDIIEKELNDSVTLSSTDRMHALSLKIVLLGKIYAGTPR
FFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVSLPRLLEVYDQLFKSRDPFWNRMKKP
LHLLDCIHVLLFKYVANPSQVSNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQTITGNF
KSLQAKLERLH
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcctctttgctgggcgcggtgatgccagcctctgcgtcggccacagccctgcaa
gaagctctggaaaatgcggggcggttaatcgatcgtcagttgcaagaagaccgcatgtac
ccggacctttccgagctgctcatggtgtctgccccaagtaatcccactgtttcgggcatg
tcagatatggattatcccctacaaggacctggtttgctatcagtacccaaccttccagag
atcagttccatccgaagagttcctctcccacctgaacttgttgaacagtttggacatatg
cagtgtaactgcatgatgggtgtttttcctgccatcagcagagcttggctcacaattgac
agtgatatattcatgtggaactatgaggatggaggagaccttgcctattttgatggactt
agtgagactatccttgctgtgggacttgtgaaaccaaaagctggcatctttcagcctcat
atacgacacctcttggttttggcaacccctgtggatatagtaattcttggactcagctat
gccaatttgcagacaggttctgggattcttaatgatagcatgtctggcggaatgcagttg
cttccagatcctttgtattctcttcccactgataatacttaccttttaacaataacttcc
actgataatggaagaattttcttggctggaaaggatggctgtttatatgaagtagcatac
caagcagaagcaggttggtttagtcaaagatgtaggaagataaaccactcaaagagctca
ctttctttccttgttccttccttgctacaatttacattctcagaagatgatcctattgtt
caaattgcaattgataattcaagaaatattttatatacacgatcagagaaaggagtaata
caggtttatgatttgggccaagatggacagggaatgagtagagttgcctcagtttcacag
aatgcaattgtctctgctgctggaaacattgcaaggaccattgatcgttctgtttttaag
ccaattgttcagatagcagtgattgaaaattctgaatcattggactgtcagttattggct
gtcacacatgcaggtatcaggttatatttcagcacttgtccatttagacagccattagca
cggcctaacacactgactctggttcacgttcgcttacctcctggattctcagcatcttca
acagtggaaaagccttcaaaagtacataaggctctttatagtaaaggtatcctattgatg
gcagcctcagaaaatgaggataatgatgttttatggtgcatcaaccatgatacgtttcct
ttccaaaagccaatgatggaaacccagatgacaacccgcgttgatggtcattcatgggct
ctttctgcaatagatgaattgaaagtagataagataattacacctttaaataaggatcat
attccgataactgactctccagttgttgtacagcaacacatgttacctccaaagaaattt
gttctcctctcagcacagggtagtcttatgtttcataaacttagacctgtagatcaactg
aggcacttacttgtgagcaacgtgggtggagatggagaagagattgaaagattctttaag
ttgcatcaggaagaccaggcttgtgcaacttgccttatcctagcttgctccactgctgcc
tgtgacagagaagtatctgcttgggcaacgcgggctttcttcaggtacggtggtgaagca
cagatgagatttccagctactcttcccactccgagtaatgttggtcccatcttgggatct
cccgtttatgctagttctcctgttcccagtggtagtccatatccaaatccatcctttttg
ggaacaccatctcaaggtatacagcctcctgctatgtcaactcctgtgtgttccatggga
aacccagcagctcaggccacaagtatgagttgtatgactggcccagagattgtatactct
ggaaaacacaatggtatttgcatttatttttctcggataatgggaaatatttgggatgct
agcttggttgtggagagggtattcaagagtggtaacagagagatcatggcaattgaaagt
agtgttccctgccaacttctggagtcagtgctacaagaattaaaaggtttgcaggaattt
ctagacagaaattcccaatttgcaggaggaccattaggaaatccaaatgctactgccaaa
gtgcagcagaggctgatgggattcatgcgtcctgaaaatggaaatactcagcaaatgcaa
caggagttacagaggaagtttcatgaggctcaactgagtgaaaaggtgtcacttcaggca
attcagcagttggttcgaaaatcataccaggccctggctttatggaaacttctttgtgaa
caccagtttactgtcattgtaggagaacttcagaaggaatttcaagagcagctgaagatc
accactttcaaagatctggtaatcagggacaaagaactcacaggagcattaattgcttct
cttatcaactgctatatcagagataatgctgctgttgatggcattagtttacatttacag
gacatctgcccacttctgtatagcactgatgatgcagtttgttctaaggcgaatgagctg
ctccagcgttcccgacaagttcaaagtaagtctgaaaaggaaagaatgttaagggaatca
ttaaaggagtatcaaaagatcagcaatcaagtggatctttccaatgtttgcactcagtat
agacaagtgcgtttttatgagggtgtggtggaactttctcttactgctgcagagaagaaa
gatcctcagggtcttggacttcatttctataaacatggagagccagaagaagacatggtt
ggacttcaggctttccaagaaagattaaacagctacaagtgtattacagacacccttcaa
gaactcgtaaatcaaagtaaggctgctcctcagtctcctagtgtacccaaaaaacctggt
cctccagtgctgtcatctgatcccaatatgctgagcaatgaagaagcaggacaccacttt
gaacaaatgctcaaattggctcagcgatccaaggatgagctctttagtattgctctttat
aattggttaatacaagctgaccttgcagataagctactacaggttgcttctccatttctg
gagccacatctagttcgaatggccaaagtggatcaaaacaaagttcgttacatggattta
ctctggaggtattatgagaagaacagaagttttagtaatgccgctcgtgtcctgtccaaa
ttagctgacatgcatagcactgaaatttcacttcagcaacggctagagtacattgcccga
gccattcttagtgccaaaagttccactgcgatttcatcaatagctgctgatggtgaattc
cttcatgaattagaagaaaaaatggaagttgctaggattcaacttcaaatacaagaaaca
ctacaaagacagtattctcatcattcttctgtacaggatgcagtttctcagttggattct
gagttaatggacataactaagctttatggggaatttgctgacccatttaaacttgcagag
tgtaaacttggaataattcattgtgcgggttattcagaccccatattggtgcagaccctt
tggcaagatatcatagagaaagaattgaatgatagtgtaacattgagctccacagataga
atgcatgctcttagtctgaagatcgtgctccttggcaaaatttatgctggcacacctcgc
ttcttccctttagattttattgtacagtttttagagcagcaagtatgtactttgaattgg
gacgtaggctttgtaattcagaccatgaatgaaattggagtgtcattacctagactatta
gaagtttatgatcaactattcaaatcaagagatccattctggaacagaatgaagaagcca
ctacaccttttggattgtatccatgtactattatttaaatatgttgcaaatcctagccaa
gtttcaaattgtgagaggagaagatttacaaatctctgcctggatgctgtttgtggttac
ctggttgagctccagtctatgagctcttcagtagcagtacaaaccatcactgggaatttt
aaatctcttcaagcaaagttagaacgacttcactga
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