Sciurus carolinensis (gray squirrel): 124987006
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Entry
124987006 CDS
T08117
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124987006
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124987006
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Stevor
Cadherin_4
DUF443
TMEM154
Motif
Other DBs
NCBI-GeneID:
124987006
NCBI-ProteinID:
XP_047411832
LinkDB
All DBs
Position
6:complement(18837855..19110502)
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AA seq
794 aa
AA seq
DB search
MLTRNCLSLLLWILFDGGLLTPLQPQPQQTLGTEPRENVIHLPGRQSHSQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGEGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDIETRKPLEPESEFIIKVQDINDNEPKFLDGPYVASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGIIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTVVNITLSDVNDNPPRFPKSIFHLKVPESSPVGSAIGRIRAVDPDFGQ
NAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SAGPFKDTATVKISVLDVDEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRY
FIDWKSDGDSYFTIDGTEGTIATNELLDRESTAQYNFSIIASKVSNPLLTSKVNILINVL
DVNEFPPEISVPYETAVCENAKPGQIIQIVSAADRDLSPAGQQFSFRLSPEAAIKPNFTV
RDFRNNTAGIETRRNGYSRRQQEFYFLPVVIEDSSYPVQSSTNTMTIRVCRCDSDGTILS
CNVEAIFLPVGLSTGALIAILLCIIILLAIVVLYVALRRQRKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPTAVEENQVRRDIKPDALCLPRPRPPVEDSTDIRDFIHQR
LQEHDLDPAAPPYDSLATFAYEGAGSLAGSLSSIDSLATDGDQDYDYLADWGPRFKVLAD
LFGEEESYNPDKVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgtttatccctgcttctctggatcctgtttgatggaggtctccta
acaccacttcaaccacagccacaacagactttaggcacagaaccaagagaaaatgttatc
catctgccagggcgacaatcacattcccaacgagttaaacgtggctgggtatggaatcaa
ttttttgtgctggaagaatacatgggctccgagcctcaatatgtgggaaagcttcattct
gacttggacaagggagagggtactgttaaatacaccctctcgggagacggtgctggcacc
gtttttaccattgatgaaactacaggcgatattcatgcaataaggagcctggatagagaa
gaaaaacctttctataccctgcgtgcacaggctgtggacatagagaccaggaaacccttg
gagcctgaatcagagttcatcatcaaagtgcaggatattaatgacaatgagccaaagttt
ttggatggaccttatgttgctagtgttccagaaatgtctcctgtgggtgcatacgtgctc
caggtcaaggccacggatgcagatgacccgacctatggaaacagtgccagagttgtttac
agcattcttcagggacaaccttatttctctattgatcccaagacaggtattattagaaca
gctttgccaaacatggatagagaagtcaaagaacaataccaagttctcattcaagccaaa
gatatgggaggacaactaggaggactggctggaacgacagtagtcaacatcaccctcagt
gacgtcaatgacaacccacctcgcttccctaaaagtatcttccatctgaaagttcctgaa
tcttctcctgttggctctgctattggaagaataagagctgtagatcctgattttggacaa
aatgcagaaattgagtataatattgttcctggagatggaggaaatttgtttgacatcgtc
acagatgaggatacacaagaaggagttataaaactgaaaaagcctttagattttgaaaca
aagaaggcatatactttcaaagtagaggcatccaaccttcaccttgaccaccggtttcac
tccgctggccctttcaaagacactgctacggtgaaaatcagtgtgctggatgtagatgag
cctcccgtgtttagcaagccactctacaccatggaggtttatgaagacaccccagtcggg
accatcattggtgctgtcacagcacaagatctggatgtgggcagtagtgccgttaggtac
ttcatagattggaagagtgatggggacagctactttacaatagatggaaccgaaggaacc
atcgccactaatgaattactagacagagaaagcactgcacaatataatttctccataatt
gcgagtaaagttagtaaccccttattaaccagcaaagtcaacatactgatcaatgtcctc
gatgtcaatgaatttcctccagaaatatctgtgccatatgagacagctgtctgtgaaaat
gcaaaaccaggacagataattcagatagtcagtgctgcagatcgagatctttcacctgct
gggcagcaattctcctttagattatcccctgaggccgccatcaaaccaaattttacagtc
cgtgacttcagaaacaacactgctgggattgaaacccgaagaaatggatacagccgcagg
cagcaagagttctatttcctccctgttgtaatagaagacagcagctacccggtccagagc
agcacaaacacaatgactattcgagtttgtagatgtgattctgacggtaccatcctgtct
tgtaatgtggaagcaatctttctgcctgtaggacttagcactggcgctttgattgcaatc
ctactctgcatcattatactcttagccatagtcgtgctgtacgtcgcgctgcgcaggcag
aggaagaaggacaccctgatgacctccaaggaggacataagggacaatgtcatccactac
gacgacgagggaggcggggaggaggacacgcaggccttcgacatcggggcgctgagaaac
ccgacggcggtcgaggagaaccaagtgcgcagggacatcaagccagacgccctctgcctg
ccccgcccgcggcccccggtggaggacagcacggacatcagggacttcatccaccagcgg
ctgcaggagcacgacctggaccccgccgccccgccctacgactcgctggccaccttcgcc
tacgagggcgcggggtcgctggccgggtcgctcagctccatcgactcgctggccaccgac
ggcgaccaggactacgactacctggcggactggggaccgcgctttaaggtcctggccgac
ctgttcggcgaagaagagagctacaaccctgacaaagtcacctag
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