Sciurus carolinensis (gray squirrel): 124987037
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Entry
124987037 CDS
T08117
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124987037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124987037
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124987037
Enzymes [BR:
ncar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124987037
5.6.2.5 RNA 5'-3' helicase
124987037
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124987037
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124987037
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
124987037
NCBI-ProteinID:
XP_047411897
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All DBs
Position
6:140467614..140500012
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AA seq
465 aa
AA seq
DB search
MVMEKPSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKE
IHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSV
ANKFYVHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQTVSN
DLEEHLEEPVAEPEPDPEPEPEQEPVSEIQEEKSEPVLEEPAPEDAQKSSSPAPTDIAQT
VQEDLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPESKPESQIPPQRPQRDQ
RVREQRINIPPQRGPRPIREAGEQGDVEPRRIVRHPDSHQLFIGNLPHEVDKSELKDFFQ
NYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGEVRLNVEEKKTRAAREG
DRRDNRLRGPGGPRGGLGGGMRGPPRGGMVQKPGFGVGRGIAPRQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggttatggagaagcctagtcccctgctggtcgggcgggaatttgtgagacagtattac
acactgctgaaccaggccccagatatgctgcatagattttatggaaagaactcttcctat
gtccatgggggattggattcaaatggaaagccagcagatgcagtctatggacagaaagaa
attcacaggaaagtaatgtcacaaaacttcaccaactgccacaccaagattcgccatgtt
gatgctcatgctactcttaatgatggtgtggtggtccaggtgatggggctgttatcaaac
aacaaccaggctttgagaagattcatgcaaacatttgtccttgcccctgagggctctgtt
gcaaataaattctatgttcataatgatatcttcagataccaagatgaggtctttggtggc
tttgtcactgagcctcaggaggaatctgaggaagaagtagaggagcctgaagaaagacag
cagacacctgaggtggtacctgatgattctggaacgttctatgatcagactgtcagcaat
gacttggaagaacatttagaggagcctgttgctgaaccggagcctgatcctgaaccagaa
ccagagcaagaacccgtatctgaaatccaagaggaaaagtctgagccggtattagaagaa
cctgctcctgaggatgctcagaagagttcttctccagcacctacagacatagctcagaca
gtacaggaagacctgaggacattttcttgggcatctgtgaccagtaagaaccttcctccc
agtggagctgttcctgttactgggataccacctcacgttgttaaagtaccagcttcacag
ccccgtccagagtctaagcctgaatctcagattccaccccagaggcctcagagggatcaa
agagtacgagaacaacgaataaatattcctcctcagaggggacccagaccaattcgtgag
gctggtgagcaaggtgatgttgagccccgaagaattgtaagacaccctgatagtcaccaa
ctcttcattggcaacctgcctcatgaagtggacaaatcagaacttaaagatttctttcaa
aattatgggaatgtggtggagctgcgcataaatagtggtggaaaattacccaattttggc
tttgttgtgtttgatgattctgagcctgttcagaaggtccttagcaacaggcccatcatg
ttcagaggtgaagtccgactgaatgtggaagagaagaagactcgggctgctcgggaaggg
gaccgtcgagataaccgcctgcgaggacctggaggccctcgaggtgggctgggtggtgga
atgagaggccctccccgtggaggcatggtgcagaaaccaggatttggagtgggaaggggg
attgctccaaggcagtga
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