Sciurus carolinensis (gray squirrel): 124987062
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Entry
124987062 CDS
T08117
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X1
KO
K12184
ESCRT-I complex subunit VPS28
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124987062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124987062
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124987062
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
124987062
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124987062
Exosomal proteins of other body fluids (saliva and urine)
124987062
Exosomal proteins of colorectal cancer cells
124987062
Exosomal proteins of bladder cancer cells
124987062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
124987062
NCBI-ProteinID:
XP_047411948
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All DBs
Position
1:827034..831051
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AA seq
240 aa
AA seq
DB search
MVPLGQNRGSHSVADRACRMFHGIPATPGMGAPGNKPELYEEVKLYKNAREREKYDNMAE
LFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRL
DCPLAMERVKEDRPITIKDDKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELM
ETMHRMSHLPPDFEGRQTVNQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggttcccctaggccaaaatcgggggtctcactctgtggctgaccgagcctgcaggatg
tttcacgggatcccagccactccgggcatgggagcccctgggaacaagccagagctgtat
gaggaagtgaagttgtacaagaatgcccgggagagagagaagtatgacaacatggcagag
ctgtttgcagtagtgaagacaatgcaggcactggaaaaagcatacatcaaggactgcgtc
acccccaacgagtacactgcagcctgctctcggctcctggtccagtacaaagctgccttc
cggcaggttcaaggctcagaaatcagttccattgatgaattctgccgcaagttccgcctg
gactgcccgctcgccatggagagggtcaaggaggacaggcccatcaccatcaaggacgac
aagggcaacctcaatcgctgtattgccgatgttgtctcactcttcatcacagtcatggac
aaactgcgcctagagatccgtgccatggatgagatccagcccgacctgcgggagctgatg
gagaccatgcaccgcatgagccacctgcccccagacttcgagggccgccaaacagtcaac
caatggctacagaccctgagtggcatgtcagcatccgacgagctcgatgactcccaggtg
cgtcagatgctcttcgatctggagtctgcctacaacgcctttaaccgcttcttgcacgcc
tga
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