Sciurus carolinensis (gray squirrel): 124987063
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Entry
124987063 CDS
T08117
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124987063
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124987063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124987063
03041 Spliceosome [BR:
ncar03041
]
124987063
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124987063
mRNA cycle factors
Common to processing body (P body) and stress granule
124987063
Spliceosome [BR:
ncar03041
]
Common components
Common spliceosomal components
hnRNP proteins
124987063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124987063
NCBI-ProteinID:
XP_047411945
LinkDB
All DBs
Position
6:complement(115654293..115655336)
Genome browser
AA seq
320 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGHGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPR
NQGGYGGSSSSSSYGSGRRF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcagagtcccctaaagagcccgaacagctgcggaagctattcatcggaggg
ctgagctttgaaacaactgatgagagtctgagaagccattttgagcaatggggaaccctc
acggactgtgtggtaatgagagacccaaacaccaagcgctccaggggctttgggtttgtc
acttatgccactgtggaggaagtggatgcagccatgaatgcaagacctcacaaggtggat
ggaagagttgtggaaccaaagagagctgtctcaagagaagattctcaaagaccaggggcc
cacttaactgtgaaaaagatctttgttggtggcattaaagaagacactgaagaacatcat
ctacgagattattttgaacagtatgggaaaattgaagttattgaaatcatgactgacaga
ggcagcggaaagaagaggggctttgcttttgtaacttttgacgaccatgactctgtggat
aagattgtcattcagaaataccatactgtgaatggccacaactgtgaagtgaggaaagcc
ctgtcaaagcaagagatggctagtgcttcatctagtcaaagaggtcgaagtggttctgga
aactttggtggtggtcacggaggtggttttggtggaaatgacaattttggtcgtggagga
aacttcagtggtcgtggtggctttggtggcagccgtggtggtggtggatatggtggcagc
ggggatggctacaatggatttggtaatgatggaagcaattttggaggtggtggaagctac
aatgattttggcaattacaacaatcagtcatcaaattttggacccatgaagggtggaaac
tttggaggcagaagctctggaccttatggtggtggaggccaatactttgccaaaccacga
aaccaaggtggctatggcggttccagcagcagcagtagctatggcagtggcagaaggttt
taa
DBGET
integrated database retrieval system
