Sciurus carolinensis (gray squirrel): 124987092
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Entry
124987092 CDS
T08117
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
ncar03420
Nucleotide excision repair
ncar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124987092
09124 Replication and repair
03420 Nucleotide excision repair
124987092
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124987092
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncar01001
]
124987092
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124987092
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124987092
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124987092
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
124987092
2.7.11.23 [RNA-polymerase]-subunit kinase
124987092
Protein kinases [BR:
ncar01001
]
Serine/threonine kinases: CMGC group
CDK family
124987092
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124987092
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
124987092
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124987092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Seadorna_VP7
Haspin_kinase
APH
FTA2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
124987092
NCBI-ProteinID:
XP_047412005
LinkDB
All DBs
Position
6:57310074..57338070
Genome browser
AA seq
346 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM
TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRA
PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM
CSLPDYVTFKSFPGIPLQHIFIAAGDDLLDLIQGLFLFNPCTRITATQALKTKYFSNRPG
PTPGCQLPRPNCPVETLKEQSNPAMATKRKRTEALEQGGLPKKLIF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggctttagacgtcaagtctcgagcaaagcgctatgagaaactggacttcctcggggag
ggacagtttgccacggtttataaggccagagataagaacaccaaccaaatagtcgccatt
aagaaaatcaaacttggacatagatcagaagctaaagatggtataaatagaacagcctta
agagagataaaattattacaggaactaagtcatccaaatataattggtctccttgatgct
tttggacataaatctaatattagccttgtctttgattttatggaaactgatctagaggtt
ataataaaggataatagtcttgtgctgacaccatcacacattaaagcatatatgttgatg
actcttcaagggttagaatatttacatcaacactggattctacatagggatctgaaacca
aacaatttgttgctagatgaaaatggagttctaaaactggcagattttggcctggccaaa
tcatttgggagtcccaatagagcttatacacatcaggttgtaaccagatggtatcgggcc
cctgagttactatttggagctagaatgtatggtgtaggtgttgacatgtgggctgttggc
tgtattttagcagagttgcttctaagggttccttttttgccgggagattcagacctcgat
caactgacaagaatatttgaaactctaggcacgccaactgaggaacagtggcctgacatg
tgtagtcttccagattatgtgacatttaagagtttccctggaatcccactgcagcacatc
ttcattgcagcaggagatgatttgctggatctcatacaaggcttattcttatttaatcca
tgtactcgaattacagccacacaggcattgaaaactaagtacttcagtaatcggccagga
ccaacccctggatgtcaactaccaagaccaaattgtcctgtggaaaccttaaaggaacag
tcaaacccagccatggcaacaaaacggaaaagaactgaggccttggaacaaggaggattg
cccaagaagctaattttttag
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