Sciurus carolinensis (gray squirrel): 124987206
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Entry
124987206 CDS
T08117
Name
(RefSeq) homeobox protein Nkx-2.5 isoform X1
KO
K09345
homeobox protein Nkx-2.5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124987206
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
124987206
BRITE hierarchy
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
124987206
NCBI-ProteinID:
XP_047412210
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Position
6:complement(159886271..159889279)
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AA seq
322 aa
AA seq
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MFPSPALTPTPFSVKDILNLEQQQRSLAAGELSARLEATLAPASCMLAAFKPEAYSRPEA
AAGLPELRAELGPATSPPKCPPAFPAAPTFYPRAYGDPDPAKDPRADKKELCALQKVVEL
EKPEADSAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQV
KIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPARRIAVPVLVRDGKPCLGDSAPYAPAYG
VGLNAYGYNAYPAYPSYGGAACSPGYSCAAAYPAASPAAQPASAAANGNFVSFGVGDLNA
VQSPGVPQGNSGVSTLHGIRAW
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttccccagccccgcgctcacgcccacgccgttctcggtcaaagacatcctgaacctg
gagcagcagcagcgcagcctggccgccggggagctctcggcgcgcctggaggccaccctg
gcgcccgcctcctgcatgctggccgccttcaagcccgaggcctactcccggcccgaggcg
gcggccggcctccccgagctgcgcgccgagctgggccccgcgacttcgccccccaagtgc
ccgcctgctttccccgccgcccccaccttctatccgcgtgcctacggcgaccccgacccg
gccaaggaccctcgagcggataagaaagagctgtgcgcgctgcagaaagtggtggagctg
gagaagccggaggcagacagcgcggagcgtccccgggcgcggcggcggaggaagccgcgc
gtgctcttttcgcaagcgcaggtctatgagttggagcggcgcttcaagcagcagcggtac
ctgtccgctccggagcgcgaccagctggccagcgtgctgaagctcacgtctacgcaggtc
aaaatctggttccagaaccggcgctacaagtgcaagcggcaacgacaggaccagactctg
gagctggtggggctgcccccgccgccgccgccgcctgcccgcaggatcgcggtgcccgtg
ctggtgcgcgacggcaagccatgcctgggggactcggcgccctacgcgcctgcctacggc
gtgggcctcaacgcctacggctataacgcctaccccgcctaccccagctatggcggcgcg
gcctgcagccccggttacagctgcgccgccgcttaccccgctgcgtcccccgcggcgcag
cccgcctcggctgcagccaacggcaacttcgtgagcttcggcgtcggggacttgaacgct
gtgcagagtcccggggtgccgcagggtaactcgggagtgtccaccctgcacggtattcga
gcctggtag
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integrated database retrieval system
