Sciurus carolinensis (gray squirrel): 124987211
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Entry
124987211 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6A-like
KO
K06842
semaphorin 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124987211
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
124987211
NCBI-ProteinID:
XP_047412226
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All DBs
Position
6:122941696..123065359
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AA seq
1030 aa
AA seq
DB search
MRSEALLLYFTLLHFAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IMIMNRTLYLAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNEDTLFVCGTNAFNPSCRNYKIDTLEPFGDEFSGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRL
TKIAVDTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSLFLEEMSVYNPEKCSYD
GVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVKEGG
SCVHLSPNSRLTFEQDIERGNTDGLGDCHNSFVALNGHASSLLPSTTTSDAAAREGYESR
GGMLDWKDLLDSPDSTDPLGAVSSHNHQDKKGVIRESYLKGHDQLVPVTLLAIAVILAFV
MGAVFSGIIVVLCLXSPRKDVAVVQRKEKELAHSRRGSMSSVTKLSGLFGDTQSKDPKPE
AILTPLMHNGKLATPSNTAKMLIKADQHHLDLTALPTPESTPTLQQKRKPXRGSREWERN
QNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQGYQHEYVDQPKLSEVAH
MALEDQAATLEYKTIKDHLSSKSPNHGMSLVEDPDSLPPKVPQREASLGPPGASLSQNGL
GKRLEMHHSSSYGVDYKRSYPTNSLTRSHQATTLKRNNTNSSNSSHLSRNQSFGRGDNPP
PAPQRVDSIQVHSSQPSGQAVTVSRQPSLNTYNSLTRSGLKRTPSLKPDVPPKPSFAPLS
TSMKPNDACT
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaagccttgctgctatatttcacactgctacactttgctggggctggtttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacacagaggcacagactggacattcagatg
attatgatcatgaacagaaccctctaccttgctgctagggaccatatttatactgttgat
attgatacatcccatacagaagaaatttactgtagcaaaaaactgacatggaaatctaga
caggctgatgtagacacatgcagaatgaagggaaaacataaggatgagtgtcacaatttt
attaaagttcttctaaagaaaaacgaagatacgttgtttgtctgtggaaccaacgccttc
aacccttcctgcaggaactataagattgatactttggaaccttttggggatgaatttagt
ggaatggccagatgcccttatgatgccaaacacgccaacgttgcactgtttgcagatgga
aaactatactcagccacagtgactgacttcctggccatcgatgcggtcatttaccggagt
ctcggagacagccctaccctgaggaccgtcaagcatgattcaaaatggttgaaagaacca
tactttgtccaagcagtggactatggagactacatctactttttcttcagggaaattgcg
gtggagtacaacaccatgggaaaggtcgttttccccagagtggctcaggtttgtaagaat
gacatgggagggtctcagagagtcctggagaaacagtggacatctttcctgaaggctcgc
ctgaactgctcagtccctggagattctcatttttatttcaacatactccaggcggttaca
gacgtgattcgtattaatggccgtgatgttgtcctggcaaccttttccacaccttataac
agcatccctgggtctgcagtttgtgcctatgacatgcttgacattgccaatgtgtttact
gggagattcaaggaacagaagtctcccgattccacctggacaccagttcctgatgaacga
gtccctaagcctaggccaggttgctgtgctggctcatcctccttagagaaatatgccacc
tccaatgaatttcctgatgataccctgaacttcattaagactcacccactcatggatgag
gctgtgccttccatcatcaacagaccatggttcctgagaacgatggtcagataccgcctg
accaaaattgcagtagacactgctgctggaccatatcagaatcacactgtggttttcctg
ggatcagaaaaaggaatcatcttgaagttcttggccaggataggaaacagtggtttccta
aatgacagtcttttcctggaggagatgagcgtttacaacccagaaaaatgcagctatgat
ggagtcgaagacaaaaggatcatgggcatgcagctggatagagccagcagctctctgtat
gtcgcattctccacctgtgtgatcaaggttcctcttggccgctgtgaacgacatgggaag
tgtaaaaaaacttgtattgcctccagagacccatattgtgggtgggtaaaggaaggaggt
tcctgtgtccatctgtcacccaacagcagactgacttttgagcaggacatagagcgtggc
aatacagatggcctgggagactgtcacaattccttcgtggcactgaatgggcacgccagt
tccctcttgcccagcaccaccacatcagatgcggcggctcgcgaggggtatgagtctagg
ggaggaatgctggactggaaggacctgctcgattcacctgacagcacagatcctttgggg
gcagtgtcttcccataatcaccaagacaagaagggagtgattcgggaaagttacctcaaa
ggccatgatcagctcgttcctgtcaccctcttggccattgcagtcattctggcttttgtc
atgggggccgtcttctccggcatcatcgtggtactgtgtctgtgatcaccgcgcaaagat
gtggccgtggtgcagcgcaaggagaaggagcttgcccactctcgcaggggatccatgagc
agtgtcaccaagctcagtggcctctttggagacacccaatccaaagaccccaaaccagag
gccatcctcacaccgctcatgcacaacggcaagcttgccactcccagcaacacagccaag
atgctcattaaggctgaccagcaccacttggaccttaccgccttgcccaccccggagtcc
accccaacactgcagcagaagcggaagcccngccgtggcagccgggagtgggagaggaac
cagaacctcatcaatgcctgcacaaaggacatgccccccatgggctcccctgtgattccc
acggacctgcccctccgggcctcccctagccacatccccagtgtggtggtcctacccatc
acacagcagggctaccagcatgagtacgtggaccagcccaaattgagcgaggtggcccac
atggcactggaggaccaggccgccaccctggagtacaagaccatcaaagatcatctcagc
agcaagagtcccaaccacgggatgagcctcgtagaggacccggacagcctgccccccaag
gtcccacagcgcgaggcctccctgggccctccgggagcctccctgtcccagaacggcctg
ggcaagcggctggaaatgcaccactcttcttcgtatggggttgactataagaggagctac
cccacgaactcgctcacgagaagccaccaggccaccactctcaaaagaaacaatactaac
tcctccaattcctctcacctctccagaaatcagagctttggcaggggagacaacccgcca
cccgccccgcagagggtggactctatccaggtgcacagctcccagccatcgggccaggcc
gtgactgtctcgaggcagcccagcctcaacacctacaactcactgacgaggtcgggactg
aagcgtacaccctcgctaaagccagacgtacctcccaaaccctcctttgctcccctttcc
acatccatgaagcccaatgatgcgtgtacataa
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