Sciurus carolinensis (gray squirrel): 124987217
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Entry
124987217 CDS
T08117
Name
(RefSeq) sodium-dependent dopamine transporter
KO
K05036
solute carrier family 6 (neurotransmitter transporter, dopamine) member 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04082
Neuroactive ligand signaling
ncar04721
Synaptic vesicle cycle
ncar04728
Dopaminergic synapse
ncar05012
Parkinson disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05030
Cocaine addiction
ncar05031
Amphetamine addiction
ncar05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124987217
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
124987217
04721 Synaptic vesicle cycle
124987217
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
124987217
05022 Pathways of neurodegeneration - multiple diseases
124987217
09165 Substance dependence
05030 Cocaine addiction
124987217
05031 Amphetamine addiction
124987217
05034 Alcoholism
124987217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncar02000
]
124987217
Transporters [BR:
ncar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
124987217
BRITE hierarchy
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
124987217
NCBI-ProteinID:
XP_047412238
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Position
6:complement(1092974..1127295)
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AA seq
617 aa
AA seq
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MSKSECSVGPMSSVVAPAKEPNAMGPKEVELILVKEQNGVQLTNSTLINPPQSPVEERET
WGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQ
FNREGAAGVWKICPILKGVGFAVILISLYVGFFYNVVIAWALHYFFSSFSAELPWVHCNN
SWNSPRCSDAHPSNATLGAGLNDTFGTTPAAEYFERGVLHLHQSRGIDDLGPPRWQLTAC
LVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGITLPGAIDGIRAYLSVDFY
RLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIVTTSINSLTSFSSGFV
VFSFLGYMAQKHSVPIGDVAKDGPGLIFIIYPEAIATLPLSSAWAVVFFAMLLTLGIDSA
MGGMESVITGLIDEFALLHRHRELFTLCIVLATFLLSLFCITNGGIYVFTLLDHFAAGTS
ILFGVLIEAIGVAWFYGVQQFSEDIKQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVTF
RPPRYGAYIFPDWANALGWVIATSSMAMVPLYAAYKFCSLPGSFREKLAYAITPEKDRQL
VDRGEVRQFTLRHWLLV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagtgaatgctccgtgggacccatgtcctctgtggtggccccagctaaggag
cccaatgccatgggccccaaggaagtggaactcatcctggtcaaggagcagaacggggtg
cagctcacaaactccacgctgatcaacccaccacagagcccagtggaagagcgggagacc
tggggcaagaaaattgactttctgctctcagtcattggcttcgcggtggacctggccaat
gtttggcggtttccctacctatgctacaaaaatgggggaggtgccttcctggtgccctac
ctgctcttcatggtcattgccgggatgccgctcttctacatggagctagccctcgggcag
ttcaacagggaaggagctgccggagtgtggaagatctgccccatcctgaaaggcgtgggc
tttgcggtcatcctgatctcgctctacgtgggcttcttctacaacgtcgtcatcgcctgg
gcgctgcactacttcttctcctccttctcggcggagctgccctgggtccactgcaacaac
tcctggaacagcccccgctgctccgacgcccaccccagcaacgccaccctcggcgcgggc
ctgaacgacactttcgggaccacgccagccgctgagtacttcgagcgtggtgtgctgcac
ctccaccaaagccgtggcatcgacgacctgggtcctcctcggtggcagctcacagcctgc
ctggtgctggtcattgtgctgctctacttcagcctctggaagggggtgaagacctcgggg
aaggttgtgtggatcacagccaccatgccctacgtggtcctcaccgccctgctcctgcgt
gggatcacgctccccggggccatcgacggcatcagagcctacctgagtgtggacttctac
cggctctgcgaggcatccgtctggatagacgctgccacccaggtgtgcttctccctgggc
gttgggttcggagtgctcatcgccttctccagctacaacaagttcaccaacaactgctac
agagacgcgatcgtcaccacctccatcaactctctgacgagcttctcctctggctttgtc
gtcttctccttcctgggatacatggcacagaagcacagcgtgcccatcggggacgtggcc
aaggatgggccggggctgatcttcatcatctaccctgaggcgatcgcgacgctgcccctc
tcctccgcctgggccgtggtcttcttcgccatgctgctcaccctggggatcgacagtgcc
atgggcggcatggagtccgtgatcacggggctcatcgacgagttcgcgctgctgcacagg
caccgggagctcttcacgctctgcatcgtgctggccaccttcctgctgtccctcttctgc
atcaccaacgggggcatctatgtcttcacgctgctggaccacttcgcggccggcacgtcc
atcctctttggagtgctcatcgaagccatcggggtggcctggttctacggtgtccagcag
ttcagcgaggacatcaagcagatgacagggcagcggcccagcctgtactggcgtctgtgt
tggaagctggtcagcccctgcttcctcctgtttgtggttgtggtcagcatcgtgaccttc
aggccaccccgctatggagcctacatcttccctgactgggccaacgccctgggctgggtc
atcgccacgtcctccatggccatggttcccctgtacgcggcctacaagttctgcagcctg
ccggggtccttccgagagaaactggcctatgccatcacgcctgagaaggaccgccagctg
gtggacagaggggaggtgcgtcagttcacgctacgccactggctcctggtgtag
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