Sciurus carolinensis (gray squirrel): 124987257
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Entry
124987257 CDS
T08117
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124987257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124987257
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
124987257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
124987257
NCBI-ProteinID:
XP_047412332
LinkDB
All DBs
Position
6:31659904..31842703
Genome browser
AA seq
2803 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNARIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAAPFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
PLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQSEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
SQQEQTAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPVSVLQEDVIGNLKSTPENHPETP
KKKSDPEFSKSEMKQNESRLSESKPNENRLVETKSSESKLETKIETQTEELKQNESRTTE
PKQNESTIVEPKQNESRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQKSDG
RPETPKQKGEGRPETPKQKGEVRPETPKQKNEGRPETPKHRHENRRDSGKPSAEKKPDVS
KHKQDIKSDSPRVKSERAEALKQRPDGRSISESLRRDHDSKQKSDDRSESERHRGDQSRI
RRPETLRSSSRNEHGIKTDGSKTDKLERKHRHESGDSRERPSSGEQKSRPDSPRVKQGDS
NKSRPDKPGFKSPNSKDDKRTEGNRSKVDGNKAHPDNKAEFPSYLLGGRSGALKNFVIPK
IKRDKDGNITQETKKMDLKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDR
EDKSRSSLKSMKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVN
EKPKYAEISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRS
SGGGRYRNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFK
RFTASIENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTD
KTVKVLNILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTS
PNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQ
RVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTA
VFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQC
VVHLPSSEKDSNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRP
LFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARL
RKDAVTSKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQW
FRDTTLETEKAMKSQKDEESSEGTHHAKEIETTGQIMHRAENRKKFLRSIIKTTPSQFST
LKMNSDTVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVV
AVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDT
GISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPH
NDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVE
HILKYEESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQND
FMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVT
QNFKFVWACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLED
FKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNNIL
SDKNSSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQ
LYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQ
QLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIR
GNRQHRRAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVS
GSNLLQSFKESMVKDKRKERKSSPSKENESSESEEEISRPRKSRKRVDSDSDSDSEDDIN
SVMKCLPENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAI
NRKTGVHFHPKQTLDFLRSDMANSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVS
ASTNARNKAITSLLGGGSPKNNTAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQM
NESVDVMDVIAICCPKYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVP
WVDTIKESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8412 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccataactactcttgcggggattgctagtctaaca
gacctcctgaaccagctgcctcttccatctcctttacctgctacaactacgaagagcctt
ctctttaatgcacgaatagcagaagaggtgaactgccttttggcctgtagggatgacaat
ttggtttcacagcttgtccatagcctcaatcaggtatcaacagatcacatagagttgaaa
gataaccttggcagtgatgatcctgaaggcgatataccagtcttattgcaggcggtcctg
gcaaggagtcctaatgttttcagggagaaaagcatgcagaacagatatgtacaaagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aattatcaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgcccca
caaagccctgcaggatacatgccatattctcatccttcaagttacacaacacatccacag
atgcagcaagcatcagtatcaagtcccattgttgcaggtggtttgagaaacatacatgat
aataaagtttctggcccgttatctggcaattcagctaatcatcatgctgataatcctaga
cacggctcaagtgacgactacctacacatggtgcacaggctaagtagtgacgatggagat
tcttcaacaatgaggaatgctgcaccttttcctttaaggtctccacagccagtgtgctcc
cctgctggaagcgatggaacccctaaaggatcaagaccacctttaattctacaatctcaa
cctctaccctgttcatcacctcgggatgttccaccagacatcttgttagattctccagaa
agaaaacaaaagaaacaaaagaaaatgaaattaggcaaggatgaaaaagaccagagtgag
aaagctgcaatgtatgatataattagttctccatccaaggactctactaaacttacatta
agactttcccgtgttaggtcttcagacatggaccagcaagaggatatgctttctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtacccaggacagact
tcaaaaacacccattactccacaggatgtaaaccgccccctaaacgctgctcagtgtttg
tcacagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctacaaaacaaccccagacttctgtggtacagaatcagcaacaggtatca
caacagggacctatttatgatgaagtggaattggatgcattggccgaaattgaacgaata
gagagggaatcggctattgaaagggagcgcttttcaaaagaagttcaagataaagataag
cctttgaaaaaaaggaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggaagagtggactctcaggcttctataactcaggat
tcagactccataaaaaagcctgaagaaatcaaacaatgtaatgatgcacctgtttctgtt
cttcaggaagatgttattggaaatcttaaatctacaccagaaaaccatcctgagacacct
aaaaaaaagtctgatcctgagttttctaaaagtgaaatgaaacagaatgaaagtaggtta
tcagaatctaaaccaaatgaaaaccgattggtggagacgaaatcaagtgaaagtaagtta
gaaactaaaattgagacccaaacagaagagcttaaacagaatgagagcagaactaccgaa
cctaaacaaaatgagagcaccatagttgagcctaaacagaatgaaagtagactctctgac
acaaaaccaaatgacaacaaacaaaacaatggcaggtcggaaacaacaaaatcaagacct
gaaaccccaaagcaaaagggtgaaagccgacccgaaactccaaaacaaaagagtgatggg
cgtcctgaaaccccaaaacagaagggtgagggacggcctgaaactccaaagcagaaaggt
gaggtccggcctgaaactccaaagcaaaaaaatgaaggccggcctgaaacaccaaaacac
agacatgaaaataggagggattctggaaaaccatcagcagagaaaaaacctgacgtgtct
aaacataagcaggatattaaatctgattcacctcgggtaaaatcagaaagagctgaagcc
ttaaagcagagacctgatgggcgatcaatttctgagtcactaagacgtgaccatgatagt
aaacaaaaatcagatgacaggagtgagtcagagcgacatcggggggatcagtctaggatt
cgaagaccagaaacattaagatcttctagtagaaatgaacatggcattaaaactgatggt
tcaaaaactgataaattagaaagaaaacacaggcatgaatcaggagattcaagggaaaga
ccatcttctggggaacaaaaatcaagacctgacagtcctcgtgttaaacaaggagattct
aataaatcaagacctgataaacctggttttaaatcaccaaatagtaaagatgacaaaagg
acagaaggtaacaggagtaaagtagatggtaataaagcgcaccctgacaataaggcagaa
tttccaagttatttgttggggggcaggtctggtgcattgaaaaattttgtcattccaaaa
atcaagagggataaagatggcaatattactcaggagacaaagaaaatggacttgaaaggc
gagcagaaagacaaagtagaaaaaatgggattagttgaagatcttaataaaggagctaag
cctgtggtggttctgcagaaactgtctctggatgatgttcagaaactaattaaagataga
gaggataaatcaagaagttcccttaagtctatgaagaataagccatcaaagtcaaacaaa
ggtagtatagatcaatcagtgttaaaagaattaccccctgaactcctggcagaaatcgaa
tccaccatgccactttgtgaacgtgtgaaaatgaacaaacgcaagcgtagcacagtaaat
gaaaagccaaaatatgctgaaatcagttcagatgaagataatgatagtgatgaagctttt
gaatcctctaggaaacgacataaaaaagatgatgataaagcttgggaatatgaagagcgt
gacagaagaagttctggggatcataggagaagtggccactctcatgaaggaagaaggagt
tcaggtggtggtcgttatcgaaaccgaagtccatcagactctgacatggaagattattca
cctcctcccagccttagtgaggttgctagaaaaatgaagaaaaaagaaaaacagaagaaa
aggaaagcttatgaaccaaaactaacacccgaagaaatgatggactcttcaacttttaag
agattcacagcatcaatagagaatattttggataatttggaagatatggatttcactgca
tttggtgatgatgatgaaattcctcaggaactgctcttgggaaaacatcagcttaatgaa
cttggcagtgaatctgctaaaattaaagcaatgggtataatggataagctttcaactgac
aaaactgtgaaagttctaaatatcttggagaaaaatattcaggatggatcaaaactatct
actttgttaaatcataataatgataccgaagaagaagaaagattatggagagaccttatt
atggaaagagttacaaaatcagcagatgcctgtcttacaactatcaacattatgacatca
cctaacatgccaaaagccgtatacatcgaagatgtaatagaaagagttatacagtacact
aaatttcatttgcaaaatacactttatcctcagtatgatcctgtttacagattagatcct
catggaggagggttattaagttcaaaagccaaacgggctaaatgttccactcataagcag
agagtaatagtaatgctttataacaaagtttgtgacattgttagcagcttatcagaattg
ctagagatacagcttctaacagacacaacaattcttcaggtttcatccatggggataaca
ccattttttgtggaaaatgtcagtgaactacaattgtgtgccattaagttagtcactgca
gtattctcaagatatgaaaaacataggcagttaattttggaagaaatttttacttcactt
gcaagattaccaaccagtaagaggagtttaaggaacttcaggttaaatagtagtgatatg
gatggagaacctatgtatattcagatggttacagcactggttttacaacttattcagtgt
gtagtacacttaccatcatcagagaaggactctaattcagaagaagactcaaataaaaaa
gttgaccaggatgttgtcattaccaactcttatgaaacagctatgcgaacagcccaaaac
ttcctttccatcttccttaaaaaatgtggtagtaagcaaggtgaagaagattatagacca
ctcttcgaaaatttcgttcaagaccttctttcaacagtcaataagcctgaatggccagct
gctgaactactccttagtttgttagggagactgttggttcatcagttcagtaataagtct
acagaaatggctctaagagtggcatctcttgattatcttggaaccgttgctgcacgacta
aggaaagatgctgttacaagcaaaatggatcaaggctctattgaacggattttaaaacag
gtttctggaggagaagatgaaatccagcagttgcaaaaagcattgcttgattacttggat
gagaacactgaaactgacccttcactagtgttttctcgtaaattctatatagcccagtgg
tttcgtgatacaactctggaaacagagaaagcaatgaaatcacaaaaagatgaagaatct
tctgaaggaacacatcatgctaaagaaattgagacaactggtcaaattatgcatcgagct
gaaaaccggaaaaagtttcttagaagcatcatcaaaaccacaccttctcagttcagcaca
ttaaagatgaactctgatactgtggactatgatgatgcttgcttgattgttcgatacttg
gcctccatgaggccgtttgcccagagctttgatatttatttgacacagatacttcgagtt
cttggtgaaaacgcaattgccgttcgaacaaaagccatgaagtgtttatccgaagttgtt
gctgtagaccccagtattctagcaaggcttgatatgcagcgaggagttcatggacgattg
atggacaattccactagtgttcgagaagcagcagtagaattactaggtcgatttgtcctt
tgtcgacctcaacttgctgaacagtattatgatatgctaattgaaagaatattggatact
ggtatcagcgtcaggaaaagggtaataaagattctaagagacatctgtattgaacaacca
acatttccaaaaattacagaaatgtgtgtaaaaatgattcgcagagtcaatgatgaagaa
ggcattaagaaattagtaaatgaaacattccaaaaactctggtttactccaactccacac
aatgacaaagaagcaatgacaaggaaaattttaaacatcactgatgtggttgcagcatgc
agagatactggatatgactggtttgagcaactccttcaaaatttgttgaagtccgaagag
gattcctcatataaacctgtgaagaaagcttgtactcaacttgttgataacctagttgag
cacattcttaaatatgaggaatctctagctgactctgacaataaaggtgtgaattctgga
agattggtagcttgcataaccactttattcttattcagcaaaataagaccacaactcatg
gttaaacatgccatgactatgcaaccataccttaccactaaatgtagtacacaaaatgat
ttcatggttatctgcaatgttgcaaaaatcctagaactagttgtaccactgatggagcat
ccaagtgaaactttccttgccactattgaagaagatctaatgaagcttatcatcaaatat
ggcatgactgtagtgcagcattgtgtgagctgtcttggagctgtagtaaataaagtgaca
caaaattttaagtttgtgtgggcctgtttcaatagatactatggtgccatttcaaaatta
aaaagtcaacaccaagaagacccaaataacacttcgcttctaacaaataaaccagcactg
cttagatctctttttactgttggagcactgtgtcggcattttgattttgacctagaggat
tttaaaggcaacagtaaggttaacataaaggacaaagtacttgaactgttaatgtatttt
acaaaacattcagatgaagaagtacaaacaaaagccatcattggtctaggatttgccttt
attcaacatccaagtctaatgtttgagcaagaagtgaagaatctatataataatatttta
tctgataagaactcctcagtaaacttaaaaatacaagtgttaaaaaacctccagacctat
ctacaagaagaagatacacgtatgcaacaagcagatagagactggaagaaagttgcaaaa
caggaagacttaaaagaaatgggtgatgtttcctcagggatgagtagttccatcatgcag
ctttacctcaaacaggtgcttgaggcgttttttcacacccagtcaagtgtacgccacttt
gccctaaatgtcattgcattgactctaaaccaaggtcttattcatcctgttcagtgtgtt
ccatacttaattgctatgggcacagacccagaacctgctatgcggaacaaggctgatcag
cagcttgtggaaatagacaaaaaatatgctggattcattcatatgaaagcagtggctggc
atgaagatgtcctaccaagtacaacaggcaatcaatacgtgtctaaaagatcctgtaagg
ggtttcagacaagatgagtcctctagtgctttgtgctcacacctttactccatgatccgt
ggaaatcgccaacacagacgagcctttcttatttctttacttaacctctttgatgacaca
gcaaaaacagaagtgactatgctcttgtatatagcagacaatctagcctgttttccatac
cagacacaggaagagccgttgttcataatgcatcatatagacattacactctcagtttct
ggtagtaacctactgcagtcattcaaggagtctatggtaaaggacaaaaggaaagagaga
aaatcatcacctagtaaggaaaatgagtcaagtgagagtgaagaagaaatttccaggcct
cggaagtcacggaaacgtgtagattcggactcagattcagattcagaagatgatataaat
tcagtgatgaagtgtttgccagaaaattcagctcctttaattgaatttgcaaatgtctcc
cagggtattttattgcttcttatgttaaaacaacatttaaagaatctctgtggattttct
gatagtaaaattcagaaatactctccatccgaatctgcaaaagtatacgataaagcaatt
aacagaaaaacaggagttcattttcatcccaaacaaacactggacttcctgcggagtgat
atggctaattccaaaatcactgaagatgtgaagaggagtatagtaaaacagtatctagat
ttcaaacttctcatggaacatctagaccctgatgaagaagaggaagaaggagaggtgtca
gctagcacaaatgctcggaacaaagcaattacctcgctgcttggaggaggcagccctaaa
aataatacagcagagacagaagatgatgaaagtgatggggaggatagaggaggaggcact
tcagggtcattgagaaggtcaaaacgaaattcagactctacggagttggcagcacagatg
aatgaaagtgttgacgtcatggatgtcatcgctatttgctgtccaaagtacaaagatcga
ccacaaattgcaagagtagtacagaaaaccagcaatggcttcagtgttcagtggatggca
ggctcctacagtggctcctggactgaggctaagcgccgtgatggccgcaaactggtgcct
tgggtagacactattaaagagtcagacattatttacaaaaaaattgctctaacgagtgct
aataagctgactaataaagttgttcagactttacgatccctgtatgccgccaaggatggg
acttccagctaa
DBGET
integrated database retrieval system