KEGG   Sciurus carolinensis (gray squirrel): 124987261
Entry
124987261         CDS       T08117                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF2 isoform X1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncar01009]
    124987261
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncar04121]
    124987261
Enzymes [BR:ncar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124987261
Protein phosphatases and associated proteins [BR:ncar01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124987261
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124987261
SSDB
Motif
Pfam: SH3_2 SH3_1 SH3_9 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_11
Other DBs
NCBI-GeneID: 124987261
NCBI-ProteinID: XP_047412340
LinkDB
Position
6:103978832..104118527
AA seq 730 aa
MDDLTLLDLLECPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPECRTLVFCSI
EALPANLLLVRLLDGVRSGQSSGRGGSFRRLGVLTSQDGRKSRTSPRSLQASPFRPVPNI
RIHMDGVPRAKALCNYRGHNPGDLRFNKGDVILLRRQLDENWYQGEINGISGIFPASSVE
VIKQLPLPPPLCRALYNFDLRDKDKSENQDCLTFLKDDVITVISRVDENWAEGKLGDKVG
IFPILFVEPNFTARQLLEKNKGHQSSRTKNLSLVSSSSRGKAANTPTLHRGPGSRRKAPG
QFSITTALNTLNRMVHSPSGRQMVEISTPVLISSSNPSVITQHMEKADFPPSPAGQVSTY
HPAPASSGHSVATVSLPGSQQQLSTNMFVALHSYSAHGPDELDLQKGEGVRVLGKHQDGW
LRGISLVTGRVGIFPNNYVIPIFRKTSSFPDSRSPGLYATWTLSTSSVSSQGSISEGDPQ
QSRPFKSVFVPTAVVNPVKSAAGNLGQGSLRKGRNSMRKNGSLQRSAQSGIPSFVVGSLR
RSPTMVVQPQQFQFYQSQGIPSSPSALLVEMGPTSTPTGEPALTCVSRGSDARIPSTASS
VIMEGKEIPTKSEAPPKPPASAPPSILVKPENSRNGMEKQVKTVRFQNYSPPPTKHYTSH
PTSGKPEQPVTFKGSLPEAAPLSSEMTILFAHRSGCHSGQQTDLRRKSPFSKAMPPAPTA
SATQTMFPSK
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggatgatttgacgttacttgatcttctggagtgccctgtgtgttttgaaaagctcgac
gtcacagccaaagtccttccttgccagcacaccttctgcaaaccatgtctacagaggatt
ttcaaggcccataaggagctgaggtgtccagaatgcaggaccctggtgttttgcagcatc
gaggcgctgccggccaacctgctgctggtgcgtcttctggatggcgtgcgctcagggcag
agctccgggagagggggctccttccgcaggctgggcgtactaacctcacaggacggcaga
aaaagcaggaccagccccagaagtctgcaggccagccctttccggcctgtgcccaatatc
agaatacacatggatggggtgcctcgagccaaggccttatgcaactacagagggcacaat
cctggtgacctgaggttcaataagggagatgtcatcctccttcggagacagcttgatgag
aattggtaccagggggagatcaatggcatcagcgggatcttcccagccagctccgtggaa
gtcatcaagcagctgcccctgccgcccccgctctgcagggccctctacaactttgaccta
cgagacaaggataaaagtgagaaccaggattgcctgaccttcctcaaggacgatgtcatc
actgtgatcagccgagtggatgagaactgggcagaaggcaagttaggagacaaagtaggc
atctttcccatcttgtttgtagagccaaacttcaccgcaagacagctgctagagaagaac
aaagggcatcagtcatcccgcacaaaaaacctgtccctggtgtcctcatcgtccagaggc
aaagcagccaacacacccaccctccataggggcccaggatccaggaggaaggcaccagga
cagttctccatcacaacagccctgaacactctcaaccggatggtccattctccttcaggg
cgccagatggtggagatcagcactccagtacttatcagctccagcaacccctctgtgatc
acccagcacatggagaaggcagacttccctcccagtcctgcaggacaggtcagcacttac
catcctgcacctgcctcctcaggacattccgtggccacagtcagtctgcccggctctcag
caacaactctctactaacatgtttgtagccctgcactcctactcagcccacggacccgat
gagctggacctgcagaagggagaaggcgtcagggtcctggggaagcaccaggatggctgg
ctgaggggcatctccttggtcactgggcgagtcggcatcttcccaaacaactatgtcatc
cccattttcaggaagacctctagttttccagattcccggagccctggtctttatgccaca
tggacgttatccacctcctctgtgtcgtcccaaggaagcatttcagaaggtgatccccag
caaagccgtcccttcaaatccgtctttgtgcccaccgcggtagtcaaccctgtgaagagc
gcagccgggaatttaggacaaggatctcttcggaaagggcggaacagcatgagaaaaaat
ggatccctgcagagatcggcgcagtcagggatcccctcctttgtggtgggctccctccga
cgcagtcccaccatggtggtacagcctcaacagttccagttctaccagtctcaggggatc
ccctcctccccatcagcgctgctggtagagatgggacccacatctactcccactggggag
cctgccctcacctgcgtcagcagaggcagcgatgccaggatcccctcgacagccagttca
gtcatcatggaaggcaaggaaatccccaccaagagtgaggctccaccaaaaccgcccgca
tctgccccaccgtctatcctggtgaaaccagaaaactcaagaaatggcatggaaaagcaa
gtcaaaaccgtgagatttcagaattacagccctcctcccaccaaacactatacttcccat
cccacctctggaaagcctgaacagccagtcaccttcaaggggtccctgcctgaagcagct
cctttgagctcagagatgaccatcctgtttgcccaccgaagtggttgccactctggacag
cagacagacctccggagaaagtcacctttcagcaaggccatgcccccagcacccactgcc
tcagccacgcagaccatgttccccagcaaatga

DBGET integrated database retrieval system