Sciurus carolinensis (gray squirrel): 124987295
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Entry
124987295 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04082
Neuroactive ligand signaling
ncar04723
Retrograde endocannabinoid signaling
ncar04727
GABAergic synapse
ncar04742
Taste transduction
ncar05032
Morphine addiction
ncar05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124987295
04082 Neuroactive ligand signaling
124987295
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
124987295
04723 Retrograde endocannabinoid signaling
124987295
09157 Sensory system
04742 Taste transduction
124987295
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
124987295
05033 Nicotine addiction
124987295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124987295
Ion channels [BR:
ncar04040
]
Ligand-gated channels
GABA-A
124987295
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
124987295
NCBI-ProteinID:
XP_047412421
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Position
6:150087343..150103119
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AA seq
461 aa
AA seq
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MGISVNRRMVSLLPWLYIILWIENALGKLEDEGNFYSENISRILDNLLEGYDNRLRPGFG
GAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILSLNNLMVSKIW
TPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPL
KFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTV
YFHLQRKMGYFMIQXYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARH
SLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKRKAQLAAQPPVTISKA
TEPLEAEIVVHSDSKYHLKKRITSLTLPIVPSHEGSKVLTRAPILQPTPVTPPPLLPTFG
GTSKIDQYSRILFPVAFAGFNLVYWIVYLSXDTMEVSSRVE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggcatttccgtgaatcgtaggatggtgtcacttctgccctggctatacattatttta
tggatagaaaatgctctggggaaacttgaagatgaaggcaacttctactcagaaaacatc
agtcgcatcttggacaatctgcttgaaggctatgacaaccggctgcggccgggatttgga
ggtgctgtcaccgaagtcaaaacagacatttatgttaccagctttggacctgtgtcagat
gtggagatggagtatacgatggacgttttcttccgccagacctggactgatgagaggttg
aagtttggggggccaactgaaattctgagtttaaataacttgatggtcagtaaaatctgg
acacctgacactttttttaggaatggcaaaaaatcaattgctcacaatatgacaacccct
aataaactcttcagaataatgcagaatggaacaattctctacaccatgaggctgaccatc
aacgctgactgtcccatgaggctggttaactttcctatggatgggcatgcttgtccactc
aagtttgggagttatgcttaccccaaaagtgaaatcatatacacatggaaaaaagggcca
ctttactcagtagaagtcccagaagaatcttctagtctcttgcagtatgatttgattgga
caaactgtgtctagtgagacaattaaatctaacacaggtgaatatgtaataatgacagtc
tatttccacttgcaaaggaagatgggctacttcatgatacagnnatatactccatgcatt
atgacagtcattctttcccaggtgtctttctggattaataaggagtcagtaccagcaaga
actgtctttgggatcaccactgttttaacgatgaccactttaagcatcagtgcgaggcac
tccttgcccaaggtgtcatatgcaaccgccatggattggttcatagctgtgtgctttgct
ttcgtcttttctgctctcattgagtttgcagctgtcaactacttcaccaatctgcagaca
cagaaggccaaaaggaaggcacagcttgcagcccaacccccagtgacaatatcaaaggca
acagaacccttggaagcagagattgttgtgcattctgattccaagtaccatctgaaaaaa
agaattacctcgctgactttgccaatagttccatcccacgaagggagcaaagtcctcacc
agagcacccatattacagcccacacctgtcaccccaccaccactcttgccaaccttcggg
ggtaccagtaaaatagaccagtattcgcgaattctcttcccagttgcatttgcaggtttc
aatcttgtctactggatcgtttatctttccnaagacacaatggaagtgagtagtagggtt
gaatag
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