Sciurus carolinensis (gray squirrel): 124987300
Help
Entry
124987300 CDS
T08117
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124987300
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncar01007
]
124987300
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124987300
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124987300
Enzymes [BR:
ncar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
124987300
Amino acid related enzymes [BR:
ncar01007
]
Aminoacyl-tRNA synthetase
Class I (G)
124987300
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124987300
Prokaryotic type
Other AARSs
124987300
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
124987300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
tRNA-synt_1
Cnn_1N
LisH_TPL
Myo5a
Motif
Other DBs
NCBI-GeneID:
124987300
NCBI-ProteinID:
XP_047412429
LinkDB
All DBs
Position
6:156125342..156158535
Genome browser
AA seq
660 aa
AA seq
DB search
MDALVAQCSARLLQQEKEIKSLTAEIDRLKNCGYLEASPNLEQLREENLKLKYRLNILRK
SLQAERNRPTKNMININSRLQEVFGCAIKAAYPDLENPPLIVTPSQQPKFGDYQCNSAMG
ISQMLKTKEQKVNPREIAENITRHLPNNECIEKVEIAGPGFINVHLRKDFVSEQLTNLLV
NGVQLPAIGERKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGD
WGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSK
NPDIIKAWKLICDVSREEFNKIYDALDISLIERGESFYQDRMNDIVKEFEDKGFVQVDDG
RKIVFVPGCSIPLTIVKSDGGYTYDTSDLAALKQRLLEEKADMVIYVVDSGQSVHFQTVF
AAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEK
ERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLDDRGNTAAYLLYAFTR
IRSIARLASIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDY
IYELATTFTEFYDSCYCVEKDRQTGEVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctagtggctcagtgctccgcgcggctgctgcagcaggaaaaagagattaag
tctctaactgctgaaattgaccggttgaaaaactgtggctatttagaagcttctccaaat
ttggagcaattgagagaagaaaatttaaagttgaagtatcgactgaatattcttcgaaag
agtcttcaggcagagaggaacagaccaactaaaaatatgattaacatcaacagccgccta
caagaagtctttggctgtgccattaaggctgcatatccagacctggaaaatcctcctctg
atagtcacaccaagtcagcagcccaagtttggggactatcagtgtaatagtgccatgggc
atttctcagatgctcaaaaccaaggaacagaaagttaatccaagagaaattgctgaaaac
atcaccagacacctgccaaacaatgaatgtattgaaaaagttgaaattgctggtcctggt
tttattaacgtccatctaagaaaggattttgtatcagaacagttgaccaatcttctggtg
aatggagttcaactacctgccattggagagagaaaaaaggttgtagttgacttttcctct
cccaatatagctaaagaaatgcacgtaggccacctcaggtcaactatcataggagagagt
atgtgccgcctctttgaatttgcaggctatgatgtgctaaggttaaatcatgtaggagat
tgggggacccagtttggcatgctcattgctcacctgcaggataaatttccagattatctg
acagtctcacctcctattggggatcttcaggctttttataaggaatctaaaaagaggttc
gataccgaggaggaatttaagaagcgagcataccaatgtgttgttcttctccagagtaaa
aacccagatattataaaagcttggaaacttatatgtgatgtgtcccgtgaagaatttaat
aaaatctatgatgcattggacatctccttgatagagagaggggaatccttctatcaagat
aggatgaatgatattgtaaaggaatttgaagataaaggattcgtgcaagtggatgatggc
aggaagattgtgtttgtcccagggtgttccataccattaaccatagtgaaatcagatgga
ggttatacctatgatacatctgacctggctgctcttaaacaaagactacttgaggaaaag
gcagatatggttatctatgtggtagacagtggacaatctgtgcacttccagacggtattt
gctgctgctcagatgattggttggtatgaccctaaagtaactagagtgtcccatgctgga
tttggtgtggtacttggggaagacaagaagaagtttaaaacacgttcaggggaaacagtg
cgcctcatagaccttttggaagaaggactcaaacgatccatggacaaattgaaagaaaaa
gagagagataaggtcttaactgcagaggaattaaaagctgctcagacatctgtcgcttat
ggctgtatcaaatatgctgacctttcccataaccggttgaatgactacatcttctccttt
gacaaaatgcttgatgacagagggaacacggctgcttacttgctgtatgccttcactaga
atcaggtctattgcccggctggccagcattgatgaagagatgctccaaaaggctgctcgg
gagaccaagatcattttggaccacgagaaggaatggaaactaggccggtgcattttacgc
ttccctgagattttacagaagatcttagatgacttatttctccacacactctgcgactat
atttacgagctggcaaccactttcacagagttctacgacagctgctactgtgtggagaaa
gatcgacagactggagaagtcttgaaggtgaacatgtggcgcatgctgctgtgtgaagca
gtagctgccgtcatggccaaggggttcgatatcttgggaataaaacctgtccaaaggatg
taa
DBGET
integrated database retrieval system
