Sciurus carolinensis (gray squirrel): 124987395 Help Entry 124987395         CDS       T08117                                  Name (RefSeq) calnexin isoform X1   KO K08054   calnexin Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04141   Protein processing in endoplasmic reticulum ncar04145   Phagosome ncar04612   Antigen processing and presentation ncar04918   Thyroid hormone synthesis ncar05166   Human T-cell leukemia virus 1 infection Brite KEGG Orthology (KO) [BR:ncar00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     124987395  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     124987395  09150 Organismal Systems   09151 Immune system    04612 Antigen processing and presentation     124987395   09152 Endocrine system    04918 Thyroid hormone synthesis     124987395  09160 Human Diseases   09172 Infectious disease: viral    05166 Human T-cell leukemia virus 1 infection     124987395  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03110 Chaperones and folding catalysts [BR:ncar03110]     124987395    04131 Membrane trafficking [BR:ncar04131]     124987395   09183 Protein families: signaling and cellular processes    04091 Lectins [BR:ncar04091]     124987395 Chaperones and folding catalysts [BR:ncar03110]  Other chaperones and cochaperones   Calnexin / calreticulin    124987395 Membrane trafficking [BR:ncar04131]  Endocytosis   Clathrin-mediated endocytosis    Others     124987395  Autophagy   ER-phagy    Other ER-phagy associated proteins     124987395 Lectins [BR:ncar04091]  L-type lectins   124987395 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calreticulin Connexin MAP17 PFF1_TM Folate_carrier Serinc O-antigen_lig V_ATPase_I FAM176 Piezo_TM1-24 Motif Other DBs NCBI-GeneID:  124987395 NCBI-ProteinID:  XP_047412562 LinkDB All DBs Position 6:complement(134152109..134183457) Genome browser AA seq 593 aa AA seqDB search MEGKWLLCVFLVLGATVIQAHDGHEDDMIDIEDDLDDVIEEVEDSSKSDTSTPPSPKVTY KAPVPTGEVYFADSFDRGSLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGL VLMSRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFH DKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTL ILNPDNSFEILVDQSVVNSGNLLNDMTPAVNPSREIEDPEDRKPEDWDERPKIPDPDAVK PDDWDEDAPAKIPDEEATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKC ESASGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFRMTPFS AIGLELWSMTSDIFFDNFIISGDRRVVDDWANDGWGLKKAADGAAEPGVVGQMLEAAEER PWLWVVYILTVALPVFLVILFCCSGKKQSSAMEYKKTDAPQPDVKEEEEKEEEKDKGDEE EEGEEKLEEKQKSDAEEDGGTVSQEEEDRKPKAEVKEDEILNRSPRNRKPRRE NT seq 1782 nt NT seq  +upstreamnt  +downstreamnt atggaaggaaagtggttactatgtgtttttctggtccttggagctactgtcattcaggct catgatgggcatgaagatgatatgattgatattgaggatgaccttgatgatgtcattgaa gaggtagaagactcatcaaaatcagataccagtacccctccgtctccaaaggttacttac aaagctccggttccaacaggagaagtttattttgctgattcctttgacagaggatctctg tcagggtggattttatccaaagccaagaaagatgacactgatgatgaaattgccaaatat gatggaaagtgggaagtagatgaaatgaaggaaacaaagcttccgggtgataaaggactt gtactgatgtctcgagcaaagcatcatgccatctctgctaaactgaataagcccttccta tttgataccaagcctctcattgttcagtacgaggttaatttccaaaatggaatagaatgt ggaggtgcttatgtgaaactgctttccaaaacaccagaactcaacttggatcaattccac gacaagaccccctatacaattatgtttggtccagataaatgtggagaggattataaatta cacttcatcttccgccacaaaaaccctaagacgggtgtgtatgaagaaaagcacgctaag agaccagatgcagatctgaagacctactttactgataagaaaacacatctttacacatta atcttgaatccagataatagttttgaaatactagttgaccagtctgttgtgaatagtgga aatctgctgaatgatatgactccagctgtaaatccttcacgagaaattgaggacccagaa gaccggaaacctgaggactgggatgaaagacccaaaatcccagatcctgatgccgtgaag ccagatgactgggatgaagatgctcctgctaaaattccagatgaagaggccactaaacca gaagggtggttagatgatgagcctgaatatatacctgatccagatgcagagaagccagag gattgggatgaggacatggacggagaatgggaggctcctcagattgccaaccctaaatgt gagtcagcctctgggtgtggtgtctggcagcgaccaatgattgacaaccccaattataag ggcaagtggaagcctcccatgattgacaatcctaactaccagggaatctggaaaccccgg aaaataccaaatccagatttctttgaagatctggagcctttcagaatgactccttttagt gctattggtttggagctgtggtccatgacttctgacattttttttgacaactttatcatt agtggtgatcgaagagtagttgatgattgggccaacgatggatggggcctgaagaaagca gccgatggggctgccgagccaggcgtagtggggcagatgctcgaggcagctgaggagcgc ccatggctctgggtggtctacattttgactgttgctcttcctgtgttccttgttattctc ttctgctgttctggaaagaaacagtctagtgctatggagtacaagaagactgatgctcct caaccagatgtgaaggaagaagaagagaaggaagaggagaaggacaagggagatgaagag gaggaaggtgaagagaaacttgaagagaaacaaaaaagtgatgctgaagaagatgggggc actgtcagtcaagaggaggaagacagaaaacctaaagcagaggtaaaagaggatgaaatt ttgaacagatcaccgagaaacagaaagccacgaagagagtga

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