Sciurus carolinensis (gray squirrel): 124987450
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Entry
124987450 CDS
T08117
Name
(RefSeq) ubiquitin-like-conjugating enzyme ATG10 isoform X1
KO
K17888
ubiquitin-like-conjugating enzyme ATG10
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04136
Autophagy - other
ncar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124987450
04136 Autophagy - other
124987450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124987450
04121 Ubiquitin system [BR:
ncar04121
]
124987450
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124987450
Membrane trafficking [BR:
ncar04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124987450
Ubiquitin system [BR:
ncar04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
124987450
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124987450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
124987450
NCBI-ProteinID:
XP_047412649
LinkDB
All DBs
Position
6:67440542..67706907
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AA seq
216 aa
AA seq
DB search
MEEDEFFGEKTFQHHCSEFIKHSRQIGDGWEWKSSKDCSDGYMCKTHFQIKSATVVSNPG
IYNGVQTCLPVEEVLEVPLDDFEVTQTAMASEVIKYEYHVLYSSSYQVPVLYFRASFLDG
RPLALKDIWEGVHECYQTRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFMTPILKNAQ
KINRNINYITSWLSIVGPVVGLNLPLSYGKATSQDE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatgagttttttggagaaaaaacattccagcatcattgttcagaattcatt
aaacattcacgacagataggtgatggttgggaatggaaatcatcaaaggactgttctgat
ggctacatgtgcaaaacacattttcaaataaaaagtgcgactgtggtgtcaaatccagga
atatataatggtgtacaaacatgtcttcctgtggaggaggttttagaggtacccttggat
gattttgaagtgacccagactgcaatggcatccgaagtgattaaatatgaatatcatgtc
ttatattccagtagctaccaagtgcctgtactttactttagggcaagctttttagatggg
agacccttagcactgaaggacatatgggaaggagtccacgagtgctatcagacaagactg
ctacagggaccatgggacactattacccaacaggaacatccaatacttgggcaacccttt
tttgtacttcatccctgcaagactaatgaattcatgactcccatattaaagaatgctcag
aaaatcaataggaacatcaactatattacatcatggctgagcattgtagggccggttgtt
ggactgaatcttcctctaagttatggcaaagcaacctctcaagatgagtga
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integrated database retrieval system
