Sciurus carolinensis (gray squirrel): 124987482
Help
Entry
124987482 CDS
T08117
Name
(RefSeq) WD repeat-containing protein 36 isoform X1
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124987482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124987482
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124987482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_HPS5
WD40_like
eIF2A
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
124987482
NCBI-ProteinID:
XP_047412706
LinkDB
All DBs
Position
6:94737976..94774651
Genome browser
AA seq
895 aa
AA seq
DB search
MERSVEGCMASALFAGFRALGLFSNDIPHVVRFSSLKRRFYVTTCVGKSFHTYDVQKLSL
VSVSNSVPQDICCMAADGRLVFAAYGNIFSAFARNKEIVHTFKGHKADIHLLQPFGDHII
SVDADSVLIIWHIYSEEEYLQLTFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKS
NKLLYTFPGWKVGVTALQQAPAVDVVAVGLMSGQVIIHNIKFDETLMKFRQDWGPITSIS
FRTDGHPIMAAGSPCGHIGLWDLEDKKLISQMRNAQSTAIAGLTFLHREPLLVTNGADNA
LRIWIFDGPTGEGRLLRFRMGHSAPLTRIRYYGQNGQQILSASQDGTLQSFSTIHEKFNK
SLGHGLINKKRVKRKGLQNTMSVRLPPITKFAAEEARESDWDGIIACHQGKLSCSTWNYQ
RSTIGAYFLKPKELKTDDITATAVDITSCGNFAIIGLSSGTVDVYNMQSGIHRGSFGKDQ
AHKGSIRGVAVDGLNQLIITAGSEGLLKFWNFKNKSLIHSMSLDSSPNMMLLHRDSGILG
LALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDCSIRTWDLPSGCL
IDCFLLDSAPLNVTMSPTGDFLATSHVDHLGIYLWSNISLYSVVSLRPLPTDYVPSVVML
PGTCQTQDIDIPEENVEPSDEMIEYDSPEQLNEQLVTLSLLPESRWKNLLNLDVIKKKNK
PKEPPKVPKSAPFFIPTVPGLVPRYATSEQNNDPQQSKVVNLGILAQKSDFCLKLEEGLI
NNKYEAPLNLLKEMGPSGIETELRNLSPDCGGSIEVMQSFLKMIEMMLDRKRDFELAQAY
LALFLKLHLKILPSEPVLLEEMTKLSSQVEESWINLQSLFNQSMCVLNYIKSALL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaacgctccgtggaaggctgcatggcgagcgcactgttcgcggggttccgggcctta
gggctttttagtaacgacatcccgcacgtggtgcggttcagctcgctgaagcgccgattc
tacgtgacgacctgcgtgggcaagagcttccacacgtatgacgttcagaaacttagtctg
gtttcagtaagtaactctgttccacaggatatctgctgtatggcagctgatggaagacta
gtctttgctgcttatgggaatattttttctgcatttgcccgtaataaagagatagtacat
acctttaagggtcataaggcagatattcatcttttgcaaccttttggggatcacattatc
tctgttgatgctgacagcgttcttattatttggcacatatattcagaagaagagtacctt
cagttgacttttgataaatcagtttttaaaatttctgcaattttgcatccaagtacctac
ttgaacaaaatacttctgggcagtgaacaaggaagcctgcaattgtggaatgtaaaatcc
aataagcttctgtatacatttccaggatggaaagttggagtgactgctcttcagcaggca
ccagctgtggatgttgttgctgttggtctcatgtcaggtcaggttattattcacaatatt
aagtttgatgaaacattaatgaagtttcgtcaagactggggacccattacttcaatttca
tttcgcacagatggtcatccaataatggcagctggaagcccctgtggccatattggactt
tgggacctagaagataaaaaattaatcagtcaaatgagaaatgcacaatctacagcaatt
gccggactgacatttctccatagagagcctcttcttgtcacaaatggtgctgataatgct
ctcaggatatggatatttgatggtcccacaggtgaaggccgacttttgagattcagaatg
ggacatagtgctcctcttaccaggatcagatactatggacaaaatggacaacaaattcta
agtgcaagtcaagatggaactcttcaatcattttccacaatacatgaaaaattcaacaag
agcttgggacatggtttaattaacaaaaagagagtcaaacgtaaaggacttcagaatacc
atgtcagtaagacttccacctatcacaaagtttgcagctgaggaagctcgtgagagtgac
tgggatggtatcattgcttgccatcaaggtaagctatcttgctcaacctggaattatcaa
agatctacaataggtgcttactttctaaaaccaaaagaattgaagacagatgacatcact
gcaacagcagtggatataacttcttgtggaaactttgccataattggtctctcatcagga
actgtagatgtatataatatgcagtctggtattcatcggggaagttttggcaaggatcaa
gctcataagggatctattagaggtgttgcagtggatggattaaatcagttgataattaca
gctggtagtgaaggattgctcaaattctggaactttaaaaacaaaagtttaatccattct
atgagccttgattcatctccaaatatgatgctgctacatagggacagtggcattctggga
cttgccttggatgacttctccattagtgttctggacatagaaactaggaagattgtgaga
gagttttctggacaccaaggccaaataaatgacatggctttcagtcctgatggtcgttgg
ttaataagtgctgcaatggattgctctattaggacttgggaccttccatctggttgcctc
atagactgctttttgttggactcagctcctctcaatgttactatgtcccctactggagac
tttctagccacttcccacgtggaccaccttggaatttatttatggtctaatatttccctg
tattcagttgtctcattacggccacttcctacagattatgttccttcagtagtaatgctt
cctggtacttgtcaaacccaagatatagacataccagaagaaaatgtagaaccaagtgat
gaaatgatagagtatgattcaccagaacagttgaatgagcagttggtgactctctcactt
ctccctgaatcacggtggaaaaaccttcttaatctggatgttattaagaaaaagaataaa
ccaaaggaaccacccaaagtacccaaatcagcaccattttttattccaacagtccctggc
cttgtacccagatatgctacatctgaacaaaataatgatccccagcagtctaaagtggta
aatcttggaattttggctcaaaaatcagatttctgcttgaaacttgaagaaggactgata
aataataagtatgaagcccccctcaatcttctgaaagaaatgggcccatcaggaattgaa
acagagctacggaatttgtctcctgactgtggtggatctatagaagtcatgcagagtttc
ttgaaaatgattgagatgatgttggacagaaagcgtgattttgagttagcccaggcatac
cttgcattgtttctaaagttacaccttaaaatacttccttcagaaccagtactcctagaa
gaaatgacaaagttgtcatcacaagtggaagaaagctggattaatttacaatcactcttc
aatcaaagcatgtgtgttttaaattatatcaaaagtgctttgttataa
DBGET
integrated database retrieval system
