Sciurus carolinensis (gray squirrel): 124987552
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Entry
124987552 CDS
T08117
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04082
Neuroactive ligand signaling
ncar04519
Cadherin signaling
ncar04723
Retrograde endocannabinoid signaling
ncar04727
GABAergic synapse
ncar04742
Taste transduction
ncar05032
Morphine addiction
ncar05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124987552
04082 Neuroactive ligand signaling
124987552
04519 Cadherin signaling
124987552
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
124987552
04723 Retrograde endocannabinoid signaling
124987552
09157 Sensory system
04742 Taste transduction
124987552
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
124987552
05033 Nicotine addiction
124987552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124987552
Ion channels [BR:
ncar04040
]
Ligand-gated channels
GABA-A
124987552
SSDB
Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124987552
NCBI-ProteinID:
XP_047412787
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All DBs
Position
6:150232851..150284518
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AA seq
456 aa
AA seq
DB search
MKRSPGLSEYLWAWTLLLSTLTGRSYEQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPG
LGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDP
LIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKID
RLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaagtccaggtctctctgaatatctttgggcctggaccctccttctgagcacg
ttgactggaagaagctacgaacagccctcactgcaagatgaacttaaagacaacaccaca
gtcttcactaggattttggaccgactcctagacggttatgacaatcgcctgagaccaggc
ttgggagagcgtgtaaccgaagtgaagactgacatcttcgtcaccagtttcggaccagtt
tcagaccacgatatggaatatacaatagatgtgtttttccgtcaaagctggaaggacgag
agattaaaatttaaaggacccatgacagttcttcggttaaacaacctaatggcaagtaag
atctggactccagacaccttttttcacaacggaaagaagtctgtggcccataacatgaca
atgcctaataaactcctgcggatcacagaggatggcaccttactgtacacaatgaggctg
accgtgagagccgaatgcccaatgcatttggaggacttccctatggacgcccatgcctgc
ccattaaaatttggaagctatgcttatacgagagcagaagttgtctatgagtggaccaga
gagccagcacgctcggtggtggtagccgaagatgggtcacgcttaaaccagtatgatctt
cttggacaaacagtggactctggaattgtccaatccagcacaggagaatatgttgttatg
actactcacttccacttgaagagaaagattggctattttgttattcaaacatacctgcca
tgcataatgacggtcattctgtcacaagtctccttctggctcaacagagagtctgtacca
gcaagaactgtctttggagtaacaacggtgctgaccatgacaaccttgagtatcagtgcc
aggaattccctccctaaggtggcttacgcaacagctatggattggttcattgccgtgtgc
tatgcctttgtgttctcggctctgattgagtttgccacagtgaactatttcaccaagaga
ggttacgcatgggacgggaaaagcgtggttccagagaagccaaagaaggtgaaagatcct
cttattaagaaaaacaacacttatgctccaacagcaaccagctacacccctaacttggca
aggggtgaccctggcttagccaccattgctaaaagtgcaaccatagaacccaaagaagtc
aaaccggaaacgaagccaccagagcccaagaaaacctttaacagtgtcagcaaaattgac
cgcctgtcaagaatagctttcccgttgctatttggaatctttaacttagtctattgggct
acgtatctaaacagagagcctcagctaaaagcccctacaccacatcaatag
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