Sciurus carolinensis (gray squirrel): 124987558
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Entry
124987558 CDS
T08117
Name
(RefSeq) catenin alpha-1
KO
K05691
catenin alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04390
Hippo signaling pathway
ncar04520
Adherens junction
ncar04670
Leukocyte transendothelial migration
ncar05100
Bacterial invasion of epithelial cells
ncar05200
Pathways in cancer
ncar05213
Endometrial cancer
ncar05226
Gastric cancer
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
124987558
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124987558
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
124987558
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124987558
09162 Cancer: specific types
05226 Gastric cancer
124987558
05213 Endometrial cancer
124987558
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124987558
09166 Cardiovascular disease
05412 Arrhythmogenic right ventricular cardiomyopathy
124987558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124987558
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124987558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
GIT1_C
Talin_IBS2B
I_LWEQ
DivIC
Motif
Other DBs
NCBI-GeneID:
124987558
NCBI-ProteinID:
XP_047412795
LinkDB
All DBs
Position
6:97167144..97340617
Genome browser
AA seq
906 aa
AA seq
DB search
MTAVHTGNINFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTNSKGPSNKKRGRSKKAHV
LAASVEQATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGDLMKSAAGEFADDPCSSVK
RGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKAL
KPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKAN
RDLIYKQLQQAVTGISNAAQSTSSDDASQHPGGGGGELAYALNNFDKQIIVDPLSFSEER
FRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKER
SDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYA
QVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLA
QENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDR
TAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSS
DPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSVQTED
DQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMC
MIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYL
QRIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVAS
TKYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEF
KAMDSI
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgttcacacaggcaacataaacttcaaatgggaccccaaaagtctagagatt
aggactttggcagttgaaagacttttggagcctcttgttacacaggttacaaccctggta
aacaccaatagtaagggaccctctaacaaaaagagaggtcgttctaagaaggcccatgtt
ttggctgcatctgttgaacaagcaactgagaatttcttggagaagggggataaaattgca
aaggagagtcagtttctcaaggaggagcttgtggctgctgtagaagatgttcgaaagcaa
ggagatttgatgaagagtgctgcaggagagtttgcagatgatccctgttcttccgtgaag
cgaggcaatatggttcgggcagctcgagctttgctctctgctgttacccgactgctgatt
ttggccgatatggcagatgtctacaaattacttgttcagctgaaagttgtggaagatggt
atcttgaaactgaggaatgctggcaatgaacaagacttaggaatacagtataaagccctg
aaacctgaagtggataaactgaacattatggcagctaaaagacaacaggaactgaaagat
gtgggccatcgtgatcagatggctgcagctagaggaatcctacagaaaaatgttccgatc
ctttatactgcatcccaggcatgcctacagcaccctgatgttgcagcctataaggccaac
cgggatttgatatacaagcagcttcaacaggcagtcacaggcatctccaatgcagcccag
tctacttcgtcagatgatgcctcccagcatccgggtggtggaggaggagaattggcatat
gctctcaataattttgataaacaaatcattgtggaccccttgagcttcagtgaggagcgc
tttagaccctccttggaggagcgcctggaaagcatcattagtggagctgccctgatggct
gactcatcttgtacacgtgatgaccggcgtgagcgaattgtggcagagtgcaatgctgtc
cgccaggccttgcaggacctgctctccgaatacatgggcaatgctggacgtaaagaaaga
agtgatgcactcaattctgcaatagataaaatgaccaagaagaccagagacttgcgtaga
cagctccgcaaagctgtcatggaccacgtttcagattctttcctggaaaccaacgttcca
cttttagtattgattgaagctgcaaagaatggaaatgagaaagaagttaaggagtatgcc
caagtttttcgtgaacatgccaacaaattgattgaggttgccaacttggcctgttccatc
tcaaacaatgaagaaggagtaaagcttgttcgaatgtctgcaagccagttagaagcactc
tgtcctcaggtaattaatgctgcattggctttagcagcaaaaccacaaagcaaactggcc
caagagaacatggatctttttaaagagcagtgggaaaaacaagtccgtgttctcacagat
gctgttgatgacattacttccatcgatgacttcttggctgtctcagaaaatcacattttg
gaagatgtgaacaaatgtgtcattgctctgcaagagaaagatgtggatgggctggaccgc
acagctggtgcaattcgaggccgggcagcccgggtcattcacgtagtcacctcagagatg
gacaactatgagccaggagtctacacagaaaaagttctggaagctaccaagctgctgtcc
aacacagtcatgccacgtttcacagagcaagtggaggcagctgtagaagccctcagctca
gaccctgcccagcccatggatgagaatgagtttatcgatgcctctcgcctggtatatgat
ggcatccgggacatccggaaagcagtgctgatgataaggacccctgaggagttggatgac
tctgactttgagacagaagattttgatgtcagaagcaggacaagcgtccagacagaagat
gaccagctaatagctggccaaagtgcccgggcaatcatggctcagcttccacaggagcaa
aaagcaaagattgcagaacaggtggccagtttccaggaagaaaagagcaagctggatgct
gaagtgtccaaatgggatgacagtggcaacgacatcattgtgctggccaagcagatgtgt
atgattatgatggagatgactgactttacccgaggtaaaggaccactcaaaaatacatca
gatgtgattagtgctgccaagaaaatcgctgaggcaggatccaggatggataagcttggc
cgaaccattgcagatcactgcccagactccgcctgcaagcaggacctgctggcctacctg
cagcgtatcgccctctactgccaccagctcaacatctgcagcaaagtcaaggctgaggtc
cagaaccttggtggagagcttgttgtctctggggtggacagcgccatgtccctgatccag
gcagccaagaacttgatgaatgccgtggtacagacagtgaaggcatcttatgtggcctcc
accaaataccaaaagtcccagggcatggcttccctcaaccttcctgctgtgtcctggaag
atgaaggcacctgagaagaagcccttggtgaagagagagaagcaggatgagacacagacc
aagatcaagcgggcatctcagaagaagcatgtgaaccctgtgcaggccctcagtgagttc
aaagccatggacagcatctaa
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