Sciurus carolinensis (gray squirrel): 124987577
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Entry
124987577 CDS
T08117
Name
(RefSeq) WD repeat-containing protein 41 isoform X1
KO
K23610
WD repeat-containing protein 41
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04140
Autophagy - animal
ncar05014
Amyotrophic lateral sclerosis
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124987577
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124987577
05022 Pathways of neurodegeneration - multiple diseases
124987577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124987577
Membrane trafficking [BR:
ncar04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
124987577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_DCAF12
WD40_RFWD3
PorZ_N_b_propeller
Motif
Other DBs
NCBI-GeneID:
124987577
NCBI-ProteinID:
XP_047412818
LinkDB
All DBs
Position
6:complement(63271293..63316231)
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AA seq
463 aa
AA seq
DB search
MLRWLIGGGREPQGLAEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASA
GDDGIVVIWNAQTGEKLLELSGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWDC
DTGRQVQRVSCFQSTVKCLTVLKRLDIWLSGGNDLCVWNRKLDLLCKTSHLSDTGISALV
EIPKNCVIAAVGKELIIFRLVAPTEGSLEWEIIEVKRLLDHQDNILSLVNVNDKSFVTGS
HVGELIIWDVLDWTMQAYERNFWDPSPQLDTQQEIKLCQKQNDISIHHFTCDEENVFAAV
GRGLYVYNLQMKRVIACQKTAHDSNVLHIAKLPNRQLISCSEDGSVRIWELREKQQLTAE
PVPTGFFNMWGFGRVNKQASQPVKKQQENATLCSLELIGDLIGHSSSVEVLLSMFLYFED
HGLVTCSADHLIILWKNGERESGLRSLKLFQKLEENGDLYLAV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgatggctgatcgggggaggccgcgaacctcagggactggccgagaaatctcca
ttacagacaataggtgaagaacaaacccagaacccctacactgagctgcttgtactgaaa
gctcatcatgatattgtacgatttctcgtacagttagatgactacagatttgcatctgct
ggtgatgatggaattgtagtcatttggaatgcccagacaggagaaaagcttttggaactc
agtgggcacactcaaaagataacagctattattacatttccttccttggaatcttgtgaa
gaaaaaaatcaactcatcttgacagcctctgctgatcgaacagttattgtatgggattgt
gatactggcagacaagttcagagagtatcatgtttccagtctactgtaaagtgtttgacc
gttcttaagagactagatatttggctctctggtgggaatgacttatgtgtgtggaaccga
aaattagatctcctgtgtaagaccagccacctttctgatacaggtatcagtgctttggta
gaaatacctaagaactgtgtcatagcagcagttggcaaagaactgataattttcaggtta
gtagcacccacagaaggatcactggaatgggaaattattgaagttaagcgcctccttgac
caccaggataatattctctcattggttaatgtcaatgataagagttttgtcacaggctcc
catgttggagagctgatcatctgggatgtccttgactggaccatgcaggcttatgaacgc
aacttctgggacccatctccacaactggacacccagcaagaaataaaactctgtcaaaaa
caaaatgacatttctattcatcatttcacatgtgatgaagagaatgtatttgctgcagtt
ggaagaggtttatatgtgtataaccttcaaatgaagcgtgtgattgcctgccagaaaact
gcacatgactccaatgtcctgcacattgccaaacttccaaacaggcagttaatctcatgc
tcagaagatggcagtgtacgcatttgggagttaagagaaaaacagcagctcacagctgaa
cctgtaccaacaggtttttttaatatgtggggatttggaagagtgaacaaacaagccagc
caacctgttaaaaagcaacaagaaaatgccactttgtgttcactggagctcattggcgat
ttgattggacactcatcctctgtggaggtactgctttcgatgtttctgtactttgaagat
catggacttgtgacttgctctgctgatcatctcattattttgtggaaaaatggagagcga
gaatctggattgcgcagtttaaaattatttcagaaattagaggagaatggtgacttatac
ctcgctgtctag
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