Sciurus carolinensis (gray squirrel): 124987598
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Entry
124987598 CDS
T08117
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124987598
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Protocadherins
124987598
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
124987598
NCBI-ProteinID:
XP_047412843
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Position
6:99593265..99596029
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AA seq
798 aa
AA seq
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MVDLELGAEKDFPLWNPNQDTAMEMVKTKVQPKKRQVATFTVLMLLWGVGSESLHYSIME
ETESGTFVANLTKDLGLREGELADRSAQVVFKGSRQHLQLDPQTHDLLLNEKLDREELCG
STEPCVLPFQVLLENPLQFFQATLRVRDINDHAPEFAARKMLLKISEITMPGKIFPLKMA
QDLDVGSNGLQNYTISSNPHFHVLTSNRSDGRKFPELVLDKALDREEQPQFRLTLTALDG
GSPPRSGTSEIQILVLDINDNIPEFAQELYEAHIFENHPTGSLVITVSATDLDAGSFGEV
SYTLFQDDEINQVFEINAINGQIRLRKTLDFEEFQSYHVDIEATDGGGLTGKCSLIVQVL
DVNDNAPELTMSSLNSPVAENLPGIIVAVFSVSDADSGRNQEVICSIDDNLPFLLRPSVE
NFYALVTDGALDRETQSEYNITITVTDLGTPRMETEHSITVLVSDVNDNAPAFSQTSYTL
SVRENNSPALHIGGVSATDRDSGSNAQLTYSLLPPQDPHLPLASLVSINADNGQLFALRA
LDFEALQAFEFRVGATDRGSPALSSQALVRVVVLDDNDNSPFVLYPLQNASAPCTELVPR
AAEPGYLVTKVVAVDGDSGQNAWLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAARH
RLVVLVKDNGEPPLSASVTLHVLLVDGFSQPYLPLPEVAPERAQADSLTVYLVIALASVS
SLFLFSVLVFVAVRLCRRRRAAPLGVCSVPEGHFPSHLVDVSGTGTLSQSYQYEVCLAGD
SGSGEFKFLKPVIPNFPL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggtggatctggaattgggagctgaaaaggactttcccctctggaatccgaatcaagac
acagcaatggagatggtgaaaacaaaagtacagcccaagaaaaggcaagtggctaccttc
actgtacttatgcttttgtggggggtgggttcagaatcgcttcactattccataatggag
gagacagaaagtggcacgtttgtggctaacttgacaaaggacctgggacttagggaggga
gagctggctgatcggagcgcccaggttgttttcaaaggaagcaggcaacatttgcagctt
gacccacagacccatgatttgctgctaaatgaaaaactggaccgggaggagctgtgtggc
tccactgagccatgtgtgctaccttttcaggtgttactggaaaatcccttgcagtttttt
caggctaccttgcgagtcagagatataaatgaccatgccccagagtttgcagccagaaaa
atgcttctgaaaatatcagaaattactatgccaggaaagatatttcctttgaaaatggca
caggatttagacgttggcagcaatggccttcagaactacaccatcagctccaaccctcac
ttccacgtccttaccagcaatagaagcgatggcagaaagttcccagagctagtgctggac
aaagctttggatcgagaggagcagccccaattcagactaactcttaccgccctggatggc
gggtctccgccccgatcaggaacttcagagattcaaatcctggttttggacatcaatgac
aatatccctgagtttgcccaagagctctatgaggcacacatctttgagaaccaccccact
ggctcactggttattaccgtctcagctacagatttagatgcaggatcatttggggaggta
tcttacaccttatttcaagacgatgagattaaccaagtcttcgaaataaacgcaataaac
ggacaaattcgactgagaaagactttggattttgaggaatttcagtcttatcatgtggat
attgaggccacagatggtgggggcctaacaggaaaatgctctttaatcgttcaggtcctg
gacgtgaatgacaatgctcctgaattgactatgtcctcacttaacagccctgtagctgaa
aacttgccaggaataatagtggcagtttttagtgtttcagatgcagattctggacgtaac
caagaagttatttgttccatagatgacaatctcccctttcttctaagaccttcagtggag
aatttctatgctctggtaacagatggagctctggacagagaaacccaatctgagtacaac
atcaccatcacggtcaccgacttggggacacccaggatggaaaccgagcacagcataacc
gtcctggtctccgacgtcaacgacaacgcccctgccttctcgcagacgtcctacacgctg
tcggtgcgcgagaacaacagccccgccctgcacataggcggcgtcagcgccacagacaga
gactcaggcagcaacgcccagctgacctactcgctgctgccgccccaggacccgcacctg
cccctcgcctcgctggtctccatcaacgcggacaacgggcagctgttcgcgctgagggcg
ctggacttcgaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgaggctcg
cccgcgctgagcagccaggcgctggtgcgcgtcgtggtgctggacgacaatgacaactcg
cccttcgtgctctacccgctgcagaacgcctctgcgccctgcaccgagctggtgcccagg
gcggcagagccgggctacctggtcaccaaggtggtggcggtggacggagactcgggccag
aacgcctggctgtcgttccagctgctcaaggccacggagcccgggctgtttggcgtgtgg
gcgcacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaggcac
aggctggtggtgctggtcaaggacaatggcgagccgccgctgtctgccagcgtcacgctg
cacgtgctgctggtggatggcttctcgcagccctacctgccgctgccggaagtggcgccc
gagcgcgcgcaggccgactcgctgacagtctacttggtcatcgccctggcctcggtgtcg
tcgctcttcctcttttcggtgctggtgtttgtggcggtgaggctgtgcaggcggcgcagg
gcggcgccgctgggtgtgtgctctgtgcctgagggccactttcctagccacctggtggat
gtcagtggcactgggaccctgtcccagagctaccagtatgaggtgtgtctggcgggagac
tctgggtctggtgagttcaaattcctgaagcctgttatccccaacttccctctttag
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