Sciurus carolinensis (gray squirrel): 124987601
Help
Entry
124987601 CDS
T08117
Name
(RefSeq) protocadherin beta-17-like
KO
K16494
protocadherin beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124987601
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Protocadherins
124987601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
EndoS_Ig-like
Motif
Other DBs
NCBI-GeneID:
124987601
NCBI-ProteinID:
XP_047412846
LinkDB
All DBs
Position
6:99597154..99600923
Genome browser
AA seq
796 aa
AA seq
DB search
MESPLPKATQKRQVTILTLLFLLWEVGSVTIKYSILEETDSGSFVSNLKNDLGLGTGELA
KRGARILSKGNKQHLQLEQKSGNLLLKEKLDREELCGNTDPCILHFQVLLKNPVQFIQGE
LQLQDVNDHAPEFLGKEILLKISESSHLGTLFPLEIAQDLDVGSNTVQNYLISSNSHFHL
LTRNHSDGRKYPELVLEKALDREEQSEFRLTLTALDGGSPPRTGTCQVLILVLDINDNTP
EFTQGLYQVQVPENSPVGSLVITVTARDLDAGIYGQLSYSFFQSPNQVIQAFEINKASGE
IRLKKLLDFEEIDTYHMEIEASDGGGLSGKCTVVIKVMDVNDNAPELTMSLLISDIPENS
PETVVAIFGISDPDSQDNGKMMCSIQDHLPFLLKPSVENFYTLVTEGALDRETRSEYNIT
ITVTDLGTPRLKTEHSITVLVSDVNDNAPAFSQTSYTLSVRENNQPALHIGSVIATDRDS
GSNAQLTYSLLPPQDPHLPLASLVSINADNGQLFALRALDFEALQAFEFRVGATDHGSPA
LSSQALVRVVVLDDNDNSPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPEVAPERAQADSLTVYLVIALASVSSLFLFSVLVFVAVRLCRRCRAA
PLAVCSVPEGHFPGHLVDVSGTGTLSQNYRYEVYLAGSSKTSELQILKPMPPNLLDEGAD
KNMEENRNIRNHFGFN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccgctccccaaagcaacgcagaaaaggcaagtgaccatccttactttatta
tttctactgtgggaggtgggcagtgtaaccattaagtattccattctagaagaaacagac
agcggttcttttgtgtccaacctaaaaaatgatctagggctgggcacaggggagctggcc
aagaggggcgcccggattctttccaaagggaacaaacagcacttgcagcttgaacaaaag
agtggtaatttgctcctaaaagaaaaattggaccgagaggagttgtgtgggaacacagac
ccatgtatactgcatttccaggtgttactgaaaaacccggtgcagtttattcaaggtgaa
ctacagctccaagatgtaaatgaccatgccccagaattcttgggaaaggaaatccttctt
aaaatctcggaaagcagccatctgggaactctgtttcctttggaaatagctcaagatttg
gatgtgggtagcaacacagttcagaactacctaattagcagcaactcccatttccacctt
ctcactcgcaatcacagcgacggcaggaaatatcctgagctggtgctggaaaaagccctg
gaccgagaggagcaatccgagttcaggttaacccttacagctctggatggcgggtcaccg
cccagaactgggacttgccaggttctcatcctcgttctggacatcaacgacaacactcca
gaatttactcaaggactctaccaggtgcaggtcccagagaacagccctgtagggtccctt
gtaatcaccgtcaccgctagagatttagatgctgggatctatgggcagctctcctactca
tttttccaatccccaaatcaagtcattcaggccttcgaaataaataaagcctcaggagaa
atcagattgaaaaaactgttggattttgaagaaattgatacttaccacatggaaattgag
gcctcagatggcgggggtctttcaggaaaatgcactgtagtcataaaagtgatggatgta
aatgacaatgcacctgagctgactatgtcattactgatcagtgatatcccagaaaactcc
ccagaaactgtagtcgctattttcggaatttcagatccagactctcaagataatgggaaa
atgatgtgttccattcaagaccatctcccctttcttctgaaaccctcagtagaaaatttc
tacactttggtcacagaaggagccctagacagagaaacccgatctgagtacaacatcacc
atcacggtcaccgacttggggacaccaaggctgaaaaccgagcacagcataaccgtcctg
gtctccgacgtcaacgacaacgcccctgccttctcgcagacgtcctacaccctgtcggtg
cgtgagaacaaccagcctgccctgcacataggcagcgtcatcgccacagacagagactca
ggcagcaacgcccagctgacctactcgctgctgccgccccaggacccgcacctgcccctc
gcctcgctggtctccatcaacgcggacaacgggcagctgttcgcgctgagggcgctggac
ttcgaggccctgcaggcgttcgagttccgcgtgggcgccacagaccacggctcgccggct
ctgagcagccaggcgctggtgcgcgtcgtggtgctggacgacaacgacaactcgcccttc
gtgctctacccgctgcagaacgcctctgcgccctgcaccgagctggtgcccagggcggca
gaaccgggctacctggtcaccaaggtggtggcggtggacggagactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgtttggcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaggcacaggctg
gtggtgctggtcaaggacaatggcgagccgccgctgtctgccagcgtcacgctgcacgtg
ctgctggtggatggcttctcgcagccctacctgccgctgccggaagtggcgcccgagcgc
gcgcaggccgactcgctgacagtctacttggtcatcgccttggcctcggtgtcgtcactc
ttcctcttttccgtgctggtgtttgtggcggtgaggctgtgcaggaggtgcagggcggcg
ccgctggctgtgtgctctgtgcctgagggccactttcctggccacctggtagatgtcagt
ggcactgggaccctctctcagaattatcggtacgaagtttacctggcgggaagctctaag
actagtgagttacaaattcttaaaccaatgccccccaacttattggatgaaggtgctgat
aagaatatggaagagaaccgcaacattaggaatcattttgggttcaattag
DBGET
integrated database retrieval system
