Sciurus carolinensis (gray squirrel): 124987613
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Entry
124987613 CDS
T08117
Name
(RefSeq) protocadherin beta-3
KO
K16494
protocadherin beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124987613
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Protocadherins
124987613
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
124987613
NCBI-ProteinID:
XP_047412862
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Position
6:99403922..99409046
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AA seq
766 aa
AA seq
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MEAIGDSFLRQRQVLLFFVLLGGFLAGFESRRYSVAEEKERGFLIANLAKDLGLTVEDLV
ARGAQVVSKGNKQHFQFSHHTGDLLLKEKLDREELCGPTESCILHFQVLLQNPFQLITQE
LQVIDVNDHAPVFFENEMELKIPENSPPGTIIPLEYAEDLDVGRNSLQNYTITPNPHFHV
LMRSRRDGRKYPELVLDKALDREEEPEFSLTLMALDGGSPPRSGTAQIHILVLDINDNAP
EFAQSLYDVQILENIPVNSVIVTVSASDLDIGNFGTISYAFFHASEEILKTFQLNPITGD
MQLVKHLNFEAINIYEVDIEAKDGGGLSGKCTVMIQVVDVNDNPPELTFSSVNSPIPENS
VETVVAIFSVSDLDSGDNGRVKCSIPNNLPFVLKPSVENFYTLVSEGTLDRESRAEYNIT
ITVTDLGTPRLKTERSILILISDVNDNAPAFSQTSYTLSVRENNSPALHIGSVSATDRDS
GSNAQLTYSLLPPQDPHLPLASLVSINADNGQLFALRALDFEALQAFEFRVGATDRGSPA
LSSQALVRVVVLDDNDNSPFVLYPLQNASAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPEVAPDRAQADSLTVYLVIALASVSSLFLFSVLVFVAVRLCRRCRAA
PLGVCSVPEGHFPSHLVDVSGTGTLSQSYQYEVCLMGSSGTNDFKF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggaggccataggggacagctttctcagacaaaggcaagtcctgcttttctttgtttta
ctgggtgggtttctggctgggtttgagtcaagacgctattctgtggctgaggaaaaagag
aggggctttttaatagccaatctagcaaaggatctgggactgacggtagaggacctggtc
gcaaggggggcccaagttgtgtctaaaggaaacaaacagcattttcagttcagtcatcac
accggtgatctgcttctgaaggagaaattggaccgggaggagctatgtggtcctacagag
tcatgtatactgcattttcaggtattattgcaaaatcccttccagttaattacacaggaa
ctccaagtcatagatgtaaatgatcatgctccagtattctttgaaaatgaaatggagctg
aaaatccctgaaaactctccaccaggaacaataattcctttagaatatgctgaggatttg
gatgtaggaagaaacagtctccaaaactacacgattactcccaatccccattttcatgtt
ctcatgcgcagtcggagagatggaaggaagtacccagaactagtactggacaaagcactg
gatcgggaggaggagccagagttcagcttaacactcatggcgctggatggcggctcgcct
ccacggtctggaacagcccagatccacatcctggtcttagacataaatgacaatgcccca
gaatttgcacagtccctctatgatgttcaaattctagagaatatccctgttaattctgtc
attgtcactgtttcagcttctgatttagatataggaaattttgggacaatatcatatgca
ttttttcatgcttcagaagaaattctcaaaactttccaactaaatcctattaccggtgat
atgcaactagttaaacatttgaattttgaagcaataaatatttatgaagtcgacatagag
gccaaggatggtgggggtctttcaggaaaatgtacagtcatgattcaggtggttgatgtg
aatgacaacccaccagaactgaccttttcctcagttaacagtcctatccctgagaattcg
gtagagactgtggtggcaattttcagtgtttctgatctagactctggagataacggaaga
gtgaagtgttccatcccaaacaatctccccttcgtcctgaaaccatctgtagagaatttt
tacaccctagtgtctgaaggaacgttggacagggaaagcagagccgaatataacatcacc
atcacagtcaccgacttggggacacccaggctgaaaaccgagcgcagcatactaatcctc
atctccgacgtcaacgacaacgcccctgccttctcgcagacgtcctacacgctgtcggtg
cgcgagaacaacagccccgccctgcacataggcagcgtcagcgccacagacagagactca
ggcagcaacgcccagctgacctactcgctgctgccgccccaggacccgcacctgcccctc
gcctcgctggtctccatcaacgcggacaacgggcagctgttcgcgctgagggcgctggac
ttcgaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgaggctcgcccgcg
ctgagcagccaggcgctggtgcgcgtcgtggtgctggacgacaacgacaactcgcccttc
gtgctctacccgctgcagaacgcctctgcgccctgcaccgagctggtgcccagggcggca
gagccgggctacctggtcaccaaggtggtggcggtggacggagactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccacggagcccgggctgtttggcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaggcacaggctg
gtggtgctggtcaaggacaatggcgagccgccgctgtctgccagcgtcacgctgcacgtg
ctgctggtggatggcttctcgcagccctacctgccgctgccggaagtggcgcccgatcgc
gcgcaggccgactcgctgacagtctacttggtcatcgccttggcttcggtgtcgtctctc
ttcctcttttcggtgctggtgtttgtggcggtgaggctgtgcaggaggtgcagggcggcg
ccgctgggtgtgtgctctgtgcctgagggccactttcctagccacctggtggatgttagt
ggcaccgggaccctgtcccagagttaccagtatgaagtgtgtctgatgggaagctcaggg
accaatgacttcaaattttag
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