Sciurus carolinensis (gray squirrel): 124988013
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Entry
124988013 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 60-like
KO
K12029
tripartite motif-containing protein 60/61
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124988013
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124988013
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_5
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
124988013
NCBI-ProteinID:
XP_047413113
LinkDB
All DBs
Position
7:141994716..141996128
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AA seq
470 aa
AA seq
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MEFVTALANLQGECNCPICLDYLKDPVSINCGHNFCFHCLNLSWKDLNDAFPCPVCQFWF
PERKFRRNPHLCNLTEIAKLLQIRRSKRKRQEENALCEKHNQFLTLFCVKDLQILCTQCS
FSAEHQRHYVCPIKKAATYHRRILESSIEPLKTNVEXVEKVIILQSRKSLELRKKVEYRK
EEINSEFEQIRLFLQNEQEALLKQIQDEGLDILSKLNKNLITFSDHVSTVKRLLKEIEGK
CVQSDLAVLRHVKSIRQKYQNLKRPELSSFGLKKYGFSLPPQYSGLDRIIQQFQVDVSLE
LDTAYPQLIVSEDRKSVKYGRTKQSVCYNSRRFYLCPAVLGSKIFYSGRHYWEVYVGNKP
QWTLGVCHDYLPRNWRNRPSVLSGFLAIGRYIESGHVVFGPKKTQLLPVPKPSKIGIFLD
FELGEVSFYNVNDGSLLYSFSDSFTRTIWPYFYVRTDSEPLKILSVDDER
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtaaccgccctcgcaaacctccaaggggagtgcaattgtcccatctgtctg
gattacttgaaagacccagtgagcattaactgtgggcacaacttctgttttcactgcctc
aatctgtcctggaaagatctaaatgatgcctttccctgccctgtctgccaattttggttt
ccagaaaggaagttcaggaggaacccccatctctgtaatttgactgaaattgctaaactc
ctccagatcagaaggagcaagaggaagaggcaagaagaaaatgctctatgtgagaaacac
aatcaatttctgacccttttctgtgtgaaggatctgcagattttatgtacccagtgcagt
ttctctgctgaacatcagaggcactacgtttgtcccattaagaaagctgctacctaccac
agaagaattctagaatctagcatcgagcccttgaagactaatgtggaatgagttgaaaaa
gtgatcattctgcaaagcaggaagtctcttgagctgagaaagaaggtagaatataggaaa
gaagaaataaattctgaatttgagcaaattagactgtttttacagaatgaacaagaggct
ctgcttaagcagatacaagatgaagggttggacattttatcaaaacttaataaaaacctt
ataaccttttcagatcatgtttccacagtaaaacgcttactgaaggaaatagagggcaag
tgtgtgcagtcagacctggcagtactgaggcatgttaagagtatacgccaaaagtatcaa
aacctaaaacgccctgaactttcttcattcgggttaaagaagtatggctttagtcttcct
ccacagtattctggcttagacagaattatacagcaatttcaggtagatgtgagtttagaa
cttgacacagcgtatcctcagcttattgtctctgaggatagaaaaagtgtaaaatatgga
agaacaaaacaaagtgtttgttataactcaaggagattttatctctgccctgctgtcctg
ggttctaagatattttattctggtagacattactgggaggtatatgtgggaaacaaacct
cagtggacattgggtgtgtgtcatgattatcttcctaggaactggaggaatcgaccatca
gtcctgagtggcttcttggcaattggacgatatattgagagtggtcatgttgtgttcggt
cctaagaaaacccagcttctgccagtaccaaaacccagtaagattggcatttttttggat
tttgaattgggtgaggtttccttttataatgtgaatgacgggtctctcctgtatagcttc
agtgattcttttaccagaaccatttggccttatttctatgtcagaacagattctgaacct
cttaaaatcttatcagtggatgacgaaagataa
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