Sciurus carolinensis (gray squirrel): 124988096
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Entry
124988096 CDS
T08117
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04820
Cytoskeleton in muscle cells
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
ncar05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124988096
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124988096
05412 Arrhythmogenic right ventricular cardiomyopathy
124988096
05414 Dilated cardiomyopathy
124988096
05416 Viral myocarditis
124988096
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
124988096
NCBI-ProteinID:
XP_047413240
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All DBs
Position
1:20088817..20332992
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AA seq
538 aa
AA seq
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MAVAAAAAAAGPAGGGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAAYNGI
GTATNGSFCRGAGAGHPGSGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQEL
GGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQAL
KRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGGSSDPLSSQAFSFHRD
RKSIPLKMCYVTRSMALADPENRQFEIHSPDAKHTVILRSKDSATAQAWFSAIHSNVSDL
VSRVIAEVREQLGKTGIAGSREIRHLGWLAEKVPGESEKPWKPVLVVLTEKDLLIYDSMP
RRKEAWFSPAHSYPLLATRLVHSGPGKGSPQAGMDLSFATRTGTKQGIETHLFRAEISRD
LSHWTRSIVQGCHNSAELIAEITTPCTYKNQECRLTIHYENGFSVSTEPQEGAFPKTIIQ
SPYEKLKMSSDDGIRMLYLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcggcggcggcggctgggccggctggcgggggaggcggccgggcg
cagcggagcggtctgctggaagttttggtgcgggatcgctggcataaagttctggtgaac
ttgagcgaggacgccctggttctcagctgtgaggagggcgctgcggcgtacaacggcatc
gggactgccaccaatggctctttctgcaggggcgctggggccgggcacccgggttccgga
ggcgcgcagccccccgactcccctgcaggggtccgcacagccttcaccgacctgccggaa
caggtgcccgagtccatctccaaccagaagcgcggcgtgaaggtgctgaagcaggagttg
ggaggactgggcatcagcatcaaagggggcaaggagaacaagatgcctatcctcatcagc
aagatcttcaaggggctggcggccgaccagacccaagccctgtacgtgggcgatgccatc
ctgtcggtgaacggagcagacctgcgggacgccacccacgacgaggcggtgcaggcgctg
aaacgcgctggcaaggaagtgctgctggaagtgaagtacatgcgagaagccacgccctat
gtgaagaagggatcgcctgtgtccgagatcggctgggaaacgcccccgcctgagtccccc
aggttagggggcggctcctcagaccctctgtcgtcgcaggccttctccttccatagagac
cggaaaagcatccccctcaaaatgtgctacgtcactcggagcatggccttggctgaccct
gagaacaggcagtttgaaatccactctccagatgcaaagcacactgtgatactaaggagc
aaggattcagccacggcccaggcctggtttagtgccattcattccaatgttagtgacctg
gtgagccgagtgattgccgaggtcagagagcagctggggaaaacaggcattgctgggagc
cgagagatcaggcaccttggctggcttgcagaaaaggtgccaggggagagtgagaaaccg
tggaaaccagtcctggttgttctgacggagaaagaccttttaatctatgacagcatgcct
cggaggaaggaagcatggttcagcccagctcactcataccctcttcttgccaccaggctg
gtacattcaggtccagggaagggatcacctcaggctggcatggatctgtcctttgcaacc
cgaactggtaccaagcaaggcattgaaacacatctcttcagggcagagatcagcagggac
ctctcgcattggaccaggagcatcgtacaggggtgccacaactcggcggaactcattgcg
gaaatcaccaccccctgcacctacaaaaaccaggagtgccgcctgaccatccattatgag
aacggattttctgtctccaccgagccacaggagggtgcctttcccaagacaatcatacaa
tccccttatgaaaagctcaaaatgtcttctgatgatggaatcaggatgctgtatttagat
tttggaggcaaagaaggagagattcaactggatcttcattcctgccccaagccgatcgtc
ttcatcattcattcctttctctcggctaagattacaagactgggcttggtggcctaa
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