KEGG   Sciurus carolinensis (gray squirrel): 124988096
Entry
124988096         CDS       T08117                                 
Name
(RefSeq) beta-1-syntrophin
  KO
K24064  beta-syntrophin
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04820  Cytoskeleton in muscle cells
ncar05410  Hypertrophic cardiomyopathy
ncar05412  Arrhythmogenic right ventricular cardiomyopathy
ncar05414  Dilated cardiomyopathy
ncar05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124988096
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    124988096
   05412 Arrhythmogenic right ventricular cardiomyopathy
    124988096
   05414 Dilated cardiomyopathy
    124988096
   05416 Viral myocarditis
    124988096
SSDB
Motif
Pfam: Syntrophin_4th PH_17 PDZ PH PDZ_2 PDZ_6 SOS1_NGEF_PH
Other DBs
NCBI-GeneID: 124988096
NCBI-ProteinID: XP_047413240
LinkDB
Position
1:20088817..20332992
AA seq 538 aa
MAVAAAAAAAGPAGGGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAAYNGI
GTATNGSFCRGAGAGHPGSGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQEL
GGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQAL
KRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGGGSSDPLSSQAFSFHRD
RKSIPLKMCYVTRSMALADPENRQFEIHSPDAKHTVILRSKDSATAQAWFSAIHSNVSDL
VSRVIAEVREQLGKTGIAGSREIRHLGWLAEKVPGESEKPWKPVLVVLTEKDLLIYDSMP
RRKEAWFSPAHSYPLLATRLVHSGPGKGSPQAGMDLSFATRTGTKQGIETHLFRAEISRD
LSHWTRSIVQGCHNSAELIAEITTPCTYKNQECRLTIHYENGFSVSTEPQEGAFPKTIIQ
SPYEKLKMSSDDGIRMLYLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggcggtagcggcggcggcggcggcggctgggccggctggcgggggaggcggccgggcg
cagcggagcggtctgctggaagttttggtgcgggatcgctggcataaagttctggtgaac
ttgagcgaggacgccctggttctcagctgtgaggagggcgctgcggcgtacaacggcatc
gggactgccaccaatggctctttctgcaggggcgctggggccgggcacccgggttccgga
ggcgcgcagccccccgactcccctgcaggggtccgcacagccttcaccgacctgccggaa
caggtgcccgagtccatctccaaccagaagcgcggcgtgaaggtgctgaagcaggagttg
ggaggactgggcatcagcatcaaagggggcaaggagaacaagatgcctatcctcatcagc
aagatcttcaaggggctggcggccgaccagacccaagccctgtacgtgggcgatgccatc
ctgtcggtgaacggagcagacctgcgggacgccacccacgacgaggcggtgcaggcgctg
aaacgcgctggcaaggaagtgctgctggaagtgaagtacatgcgagaagccacgccctat
gtgaagaagggatcgcctgtgtccgagatcggctgggaaacgcccccgcctgagtccccc
aggttagggggcggctcctcagaccctctgtcgtcgcaggccttctccttccatagagac
cggaaaagcatccccctcaaaatgtgctacgtcactcggagcatggccttggctgaccct
gagaacaggcagtttgaaatccactctccagatgcaaagcacactgtgatactaaggagc
aaggattcagccacggcccaggcctggtttagtgccattcattccaatgttagtgacctg
gtgagccgagtgattgccgaggtcagagagcagctggggaaaacaggcattgctgggagc
cgagagatcaggcaccttggctggcttgcagaaaaggtgccaggggagagtgagaaaccg
tggaaaccagtcctggttgttctgacggagaaagaccttttaatctatgacagcatgcct
cggaggaaggaagcatggttcagcccagctcactcataccctcttcttgccaccaggctg
gtacattcaggtccagggaagggatcacctcaggctggcatggatctgtcctttgcaacc
cgaactggtaccaagcaaggcattgaaacacatctcttcagggcagagatcagcagggac
ctctcgcattggaccaggagcatcgtacaggggtgccacaactcggcggaactcattgcg
gaaatcaccaccccctgcacctacaaaaaccaggagtgccgcctgaccatccattatgag
aacggattttctgtctccaccgagccacaggagggtgcctttcccaagacaatcatacaa
tccccttatgaaaagctcaaaatgtcttctgatgatggaatcaggatgctgtatttagat
tttggaggcaaagaaggagagattcaactggatcttcattcctgccccaagccgatcgtc
ttcatcattcattcctttctctcggctaagattacaagactgggcttggtggcctaa

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