KEGG   Sciurus carolinensis (gray squirrel): 124988159
Entry
124988159         CDS       T08117                                 
Name
(RefSeq) claudin-20-like
  KO
K06087  claudin
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03272  Virion - Hepatitis viruses
ncar04382  Cornified envelope formation
ncar04514  Cell adhesion molecules
ncar04530  Tight junction
ncar04670  Leukocyte transendothelial migration
ncar05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    124988159
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124988159
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124988159
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    124988159
  09158 Development and regeneration
   04382 Cornified envelope formation
    124988159
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    124988159
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ncar03037]
    124988159
   04147 Exosome [BR:ncar04147]
    124988159
   04515 Cell adhesion molecules [BR:ncar04515]
    124988159
Cilium and associated proteins [BR:ncar03037]
 Other cilia and associated proteins
  Stereociliary proteins
   124988159
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   124988159
  Exosomal proteins of colorectal cancer cells
   124988159
Cell adhesion molecules [BR:ncar04515]
 Immunoglobulin superfamily
  L1 family
   124988159
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like
Other DBs
NCBI-GeneID: 124988159
NCBI-ProteinID: XP_047413358
LinkDB
Position
7:complement(11930553..11931285)
AA seq 219 aa
MASAGLQLLAFILALSGVSGVLIATLLPNWKVKVDVGATIVTAIVHLHGLWMDCTWYSTG
MFSCTLKHSLLSLPSHVQAARATMVLACVLSALGICTSTIGMKCTRLGGDRETKSHAALA
GGVCFVSAGTSALIPTVWYAKNIITDFLDLTIPESNKPEPGGAIYIGFISAMLLFLSGII
FCTSCLRKDPEARPRPPRQEQTFPTQRQHYPAHSLKDYV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcctcggcgggactccagctcctggctttcatcctggccctatctggggtctctggc
gtgctcatagccactctgctgcccaactggaaggtgaaagtggatgtgggcgccaccatt
gtgacggccattgtgcatctgcacgggctgtggatggactgcacgtggtacagcacaggg
atgttcagctgcaccctgaagcactccctcctgtccctcccctcccatgtgcaggctgcc
agggccaccatggtcctggcctgtgttctgtctgccctggggatctgcacctccaccata
ggaatgaaatgtactcgcttaggaggggacagagagaccaagagccatgctgcccttgct
ggaggagtctgcttcgtgtctgcagggacctctgctttgataccaacggtgtggtacgcg
aagaacatcatcactgacttcctggatctgacgattccggagagcaacaaacctgaacct
ggaggggccatctacattggcttcatttcagcaatgctgctgtttctctctggcatcatt
ttctgcacttcctgtctaagaaaggaccctgaagctcggccccgccctcccaggcaggag
cagacctttcccacacagcgccagcactacccagcgcacagcctgaaggactatgtgtag

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