Sciurus carolinensis (gray squirrel): 124988280
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Entry
124988280 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-4-like
KO
K06241
laminin, alpha 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar04518
Integrin signaling
ncar05143
African trypanosomiasis
ncar05145
Toxoplasmosis
ncar05146
Amoebiasis
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124988280
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124988280
04518 Integrin signaling
124988280
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124988280
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124988280
09162 Cancer: specific types
05222 Small cell lung cancer
124988280
09172 Infectious disease: viral
05165 Human papillomavirus infection
124988280
09174 Infectious disease: parasitic
05146 Amoebiasis
124988280
05145 Toxoplasmosis
124988280
05143 African trypanosomiasis
124988280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_laminin
EGF_LMN_ATRN
Laminin_G_3
KIF21A
COG3_N
BORCS6
Motif
Other DBs
NCBI-GeneID:
124988280
NCBI-ProteinID:
XP_047413584
LinkDB
All DBs
Position
7:51492809..51628874
Genome browser
AA seq
1910 aa
AA seq
DB search
MSVGRKPEERAQSSVLAAKRAGSGGAPQPGLLMLGFKFRPSLLIGLPGVPTSGYCRPRGG
KLPDTSAPRGDRRRSTVPEPRKALLDVRGEMALSSAWCPVLSLWLLWGVACSSAASGDDN
AFPFDIEGSSVVGRPETSEPRLAPGLLPPAAKKCDPGFFRALSGECLPCDCNGNSNECSD
SSGFCVHCQRNTTGEHCXKCLDGYIGDSIRGAPHFCQPCPCPLPHNSSFAESCYRKNGAV
RCICKENYAGPNCERCAPGYYGNPLLIGSTCXKCDCSGNSDPNLIFEDCDEVTGQCRNCL
RNTTGFKCERCAPGYYGDARTAKTCTMCNCGGGPCNSVTGECLEEGLNXPTGMDCPTISC
DKWIWDLTDDLRLAALSIEESKSGLLSVSSGAAAHRHVNEMNSTIYLLKTKLSERENQYV
LRKIQINNAENTMKSLLSDIEELVEKGSRASRKGQLVEKESTDSIDHATQLAEQAHEMRD
KIQEINNKMLYYGEEQDLGPREVSEKLVLAQKMLEEIRHRPPFLTQRELVDEEADEAHEL
LSQAENWQRLHNDTRALFPVVLEQLDDYNAKLSDLRESLDQALNHVRDAEDMNRAMAAKQ
RDHKRQHERVREQMEVVNTSLSASADSLMTPRLTLVELDDIIKNASGIYAEIDGAKNELQ
GKLSNLSNLSHDLVQEAIDHAQNLQQEADELSRNLHSSDMNGLVQKALDASNVYENIANY
VHEANETAEFALNITDRIYDAVSGIDTQIIYHKDESDNLLNQARELQAKADSSNEEAVVD
TSRRVGGAIARKSALKNRLNDAIKRLQAAERGDAQQRLGQSKLIVEEANKTIMEVQQATT
PMANNLTSWSQNLQNFDSSAYNTVVDSARDAVRNLTEVVPQLLDQLRTVEQKRPASNVSA
SIQRIRELIAQTRSVASKIQVSMMFDGQSAVEVHPKTSVDDLKAFTSLSLYMKPPMKQPE
LPGTTDQFILYLGSKNAKKEYMGLAIKNDNLVYVYNLGAKDVEIPLDSKPVSSWPSYFSI
VKIERVGKHGKVFLTVPSLSSTAEEKFIKKGEFTGEDSLLDLDPEDTVFYVGGVPSNFKL
PASLNLPGFMGCLELATLNNDVISLYNFKHIYNMDPSKSVPCARDKLAFTQSRAASYFFD
GSSYAVVRDITRRGKFGQVTRFDIEVRTPADNGLVLLMVNGSMFFSLEMLNGYLHVFYDF
GFSTGPVHLEDTLKKAQINDAKYHEISIIYHNDKKMILVVDRRHVKSMDNEKMKIPFTDI
FIGGAPPEILQSRTLRAHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLI
SRRAYFNGQSFIASVQKISFFDGFEGGFNFRTLQPNGLLFYYASGSDVFSISLDNGTVTM
NVKGIKVQSADKQYNDGLSHFIITSVSPTRYELVVDKNRLGNKNPTKGKAEHIQATEKKF
YFGGSPISPQYANFTGCISNAYFTRLDRDVEVEDFQRYSEKVHTSLYECPIESSPLFLFH
KKGKNSSKPKASQNKKGEKSKDAPSWDPAGLKFPEQNIPRDSLCHLSNSPRAIEHAYQYG
GTANSRQEFEHLQGDFGEKSQFSISLKTRSSHGMIFYVSDQEENDFMTLFLAHGRLVFMF
NVGHKKLKIRSQEKYNDGSWHDVIFVREKSSGRLIIDGLRVLEESLPPSGAAWKIKGPIY
LGGVAPGRAVKNVQINSVYSFSGCLSNLQLNGASIISASQTFSVTPCFEGPMETGTYFST
EGGYVVLDESFNIGLKFEIAFEVRPRSNSGTLVHGHSVNGEYLNVHMKNGQVIVKVNNGI
RDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDVDSEVNHVVGPLNPKPVDHREPVFVGG
VPESLLTPRLAPGKPFTGCIRHFVIDGRPVSFSKAALVSGAVSINSCPAA
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgggaaggaagccagaagagcgagcacagtcctccgtcctggccgccaagcgc
gctggctctggcggggcaccccagcccgggcttttgatgctgggctttaagttccgtcca
tctttgctgattgggctgcctggcgttcccacatctggatactgcagacccagaggaggt
aaattaccagacaccagcgcaccccgtggggaccgaagaagatcaacagttccagagccg
cggaaagcgctgttggatgtccgcggagagatggctttgagctcagcctggtgcccagtc
ctgtctctgtggctcctctggggtgttgcctgttctagcgcggcgtccggggacgacaac
gcctttccttttgacatcgaagggagctcagtggtcggcaggcctgagacgagtgaaccc
cgcctggctccgggactcctgcctcctgctgccaagaaatgtgaccctggattctttcgc
gccctgtcaggagaatgcttgccctgtgactgtaacggtaattccaatgaatgctcagac
agctctggattctgtgtgcactgccagaggaatacaacaggggagcactgtngaaaatgt
ctggatggttatattggagattccatcaggggagcaccccacttctgccagccatgcccc
tgtcccttgccccacaattctagttttgcagaatcctgctataggaaaaatggagctgtg
cggtgcatttgtaaagaaaactatgctggacctaactgtgaaagatgtgctcctggttac
tatggaaaccccttgctcattggaagcacctgtnaaaaatgtgactgcagtggaaattca
gaccccaacttgatctttgaagattgtgatgaagtcactggccaatgtaggaattgctta
cgaaacaccacaggattcaagtgtgaacgctgtgctcctggatactacggggacgccagg
acagccaagacttgtacaatgtgcaattgtggaggaggcccatgtaacagtgtgaccgga
gaatgcttagaagaaggtttgaacnntcctacaggcatggactgcccaaccataagctgt
gataagtggatctgggatctgactgacgacctgcggttggcagcgctgtccattgaagaa
agcaaatccgggctgctgagcgtgtcatcgggtgccgcagcgcacaggcacgtgaatgaa
atgaactccaccatctacctcctcaaaacaaaattgtcagaaagagaaaaccagtatgtc
ctaagaaagatacaaatcaacaatgctgagaacacaatgaaaagccttctgtctgacata
gaggaattagttgaaaagggaagtcgagcctccagaaagggacaactggttgagaaggaa
agcacagattccattgaccatgcaactcagcttgcagagcaagcccacgagatgagggat
aaaatccaagagatcaacaacaagatgctctactacggggaggagcaggacctgggaccc
agagaagtctctgagaagctggtgctggcccagaagatgcttgaggagattcgacaccgt
ccaccattccttacccagcgagagctcgtggatgaggaggcggatgaggcccacgaattg
ctgagccaggctgagaactggcagcgactgcataatgacactcgcgctctgtttcctgtt
gtcctggagcagctggatgactacaacgccaaattatcagacctccgggaatcacttgac
caggccctcaaccatgtcagggatgccgaagacatgaacagggccatggcagccaagcag
cgagaccacaagagacaacatgaacgagtgagagaacaaatggaagtggtgaacacttct
ctgagcgcatctgcagactctctgatgacacctcgtctgactcttgtggaacttgatgat
ataataaagaatgcctcaggaatttatgcagaaatagatggagccaaaaacgaactccaa
ggaaaactatctaacctaagtaacctcagtcatgacttagtccaagaagctattgaccat
gcacagaaccttcaacaagaagctgatgaattgagcaggaatttgcacagttcagatatg
aatgggctggtgcagaaggctttggatgcatcaaatgtctatgaaaatattgccaattac
gttcatgaagccaatgaaacagctgaattcgctttgaacatcactgaccgaatttacgat
gctgtaagtgggattgatactcaaatcatttaccataaagatgaaagtgacaaccttctc
aatcaagcgagagaactgcaagcaaaggcagattctagcaatgaggaggccgtagttgac
accagtaggcgtgtaggcggggccatagccaggaaaagtgctcttaaaaacagattaaat
gatgcaatcaagcgactacaagcagcagagagaggtgatgctcaacagcgcctgggtcag
tccaagctgattgtggaggaagccaacaagacgatcatggaggtccaacaggccaccacc
ccaatggctaacaatctcaccagctggtcacagaatcttcagaattttgactcttctgct
tataacaccgtggtggactctgctagagatgcagtaagaaatctgacagaggttgttcct
cagctcctggatcagcttcgtacagttgagcagaagcggcctgcaagcaatgtttctgcc
agcatccagaggatccgagagctcattgctcagaccaggagtgttgccagcaagattcaa
gtctccatgatgtttgatggccaatcagctgtggaagtgcaccccaaaaccagtgtggat
gacttaaaggccttcacatccctaagcctgtacatgaaacctcctatgaagcagccggaa
ctacctggaaccacagatcagtttatcctgtatctcggaagcaaaaatgccaaaaaagag
tacatgggtcttgcaataaaaaatgataacctggtatatgtttacaacttgggagctaag
gatgtggagattccccttgactccaagcctgtcagttcctggccttcttacttcagcatt
gtcaagatagaaagggtagggaaacatggaaaggtgtttttgacagtcccaagtctgagt
agcacagcagaggaaaagtttattaaaaagggggagttcacaggagaggactccctgctg
gatctggaccctgaggacactgtcttttatgttggtggggtgccttcaaacttcaagctt
ccagccagcttaaatcttcctggcttcatgggctgcctggagttggccactttgaataat
gatgtgatcagcttgtacaactttaagcacatttataatatggatccctccaaatcagtg
ccctgtgccagagataaactggccttcactcagagtcgggctgccagttacttctttgat
ggctctagttatgcagtggtgagggacatcacaaggagagggaagtttggtcaggtgact
cgctttgacatagaagttcgaacaccagctgacaatggccttgtgctcctgatggtcaat
ggaagtatgtttttcagtttggaaatgctcaatggctacctacatgtgttctatgacttt
ggattcagcactggtcccgtgcatcttgaagatacattgaagaaagcccaaattaatgat
gcaaaataccatgagatctcaatcatttaccacaatgacaagaaaatgattttggtagtt
gatagacggcatgtcaagagcatggacaatgaaaagatgaaaataccctttacagatata
ttcattggaggggctcccccagaaatcttacaatccaggaccctaagggcacaccttccc
ctagatatcaacttcagaggatgtatgaagggtttccagttccaaaagaaagatttcaat
ttactagagcagacagaaaccctaggagttggttatggatgcccagaagactctcttata
tcccgtagagcatatttcaatggacagagtttcattgcttcagttcagaaaatatctttc
tttgatggctttgaaggaggttttaatttccgaacattacaaccaaatggattactgttc
tattatgcttcagggtctgatgtgttttccatttcactggataatggtactgtcaccatg
aatgtcaagggcatcaaagttcagtcagcagataagcagtacaatgatgggctgtcccac
ttcatcataacctctgtctcacccacaagatacgaactggtagtagataagaacagactt
gggaataagaatcctaccaaagggaaagcagaacacattcaagcaactgaaaagaagttt
tacttcggtggctctcccatcagtccccagtatgctaacttcactggctgtataagtaat
gcctactttaccaggttggatagagatgtggaggtcgaggatttccagcggtattctgaa
aaggtccacacttctctttatgagtgtcccattgagtcttcaccattgtttctatttcac
aaaaaaggaaaaaattcctcaaagcctaaagcaagccagaataaaaagggagagaaaagt
aaagatgcaccttcatgggatcctgctggcctgaagttcccagagcagaatattcctaga
gactctctttgtcacctttccaacagccctagagcaatagagcatgcctatcaatatgga
gggacagccaacagccgccaagagtttgaacacttacaaggagattttggtgaaaaatct
cagttttccataagtctgaaaactcgttcctcccatggtatgattttctacgtctccgat
caagaagaaaatgacttcatgaccttattcttggcccatggtcgcttggttttcatgttt
aatgttggccacaagaaactgaagattagaagccaggagaaatacaatgatggatcatgg
catgatgtaatttttgttcgggaaaagagcagtggtcgactgatcattgatggtcttcga
gtcctagaagaaagtcttcctccttctggagctgcctggaaaatcaagggtcccatatat
ttgggaggagtggctccaggaagggctgtgaaaaatgtccagattaactcagtctacagt
ttcagtggctgtctcagcaatctccagctcaatggggcctccatcatctctgcttctcag
acatttagtgtgaccccttgttttgaaggtccaatggaaacaggaacttatttttcaaca
gaaggaggatatgtggttctagatgagtcttttaatattggattaaaatttgaaattgca
tttgaagttcgtcccagaagcaactctggaacgcttgtccatggccacagtgtcaatggg
gagtacctaaatgttcacatgaaaaatgggcaggtcatagtgaaagtcaacaatggcatc
agagacttttctacctcagtaacacccaagcagagcctctgtgatggcagatggcacaga
ataacagttattagagattcaaatgtggttcaactggatgttgactctgaagtgaaccat
gtggttggacccctgaatccaaaaccagttgatcacagggagcctgtgtttgttggaggt
gttccagagtcactactgacaccacggttggcccctggaaaacccttcacaggctgcatc
cgccactttgtgatcgatgggcgcccagtgagcttcagtaaagcagccctggtcagcggt
gctgtgagcatcaactcttgtccagcagcctga
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integrated database retrieval system
