Sciurus carolinensis (gray squirrel): 124988394
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Entry
124988394 CDS
T08117
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Q isoform X1
KO
K13160
heterogeneous nuclear ribonucleoprotein Q
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124988394
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
124988394
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124988394
NCBI-ProteinID:
XP_047413821
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All DBs
Position
7:76038895..76066927
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AA seq
604 aa
AA seq
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MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGKRG
RGRS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaacatgttaatggaaatggtactgaagagcccatggatactacttctgca
gttatccattcagaaaattttcagacattgcttgatgctggtttaccacagaaagttgct
gaaaaactagatgaaatttacgttgcagggctagttgcacatagtgatttagatgaaaga
gctatcgaagctttaaaagagttcaatgaagacggcgcattggcagttcttcaacagttt
aaagacagtgatctctctcatgttcagaacaaaagtgcctttttatgtggagtcatgaag
acttacaggcagagagaaaaacaggggaccaaagtagcagattctagtaaaggaccagat
gaggcaaaaattaaggcactcttggaaagaacaggctacacacttgatgtgaccactgga
cagaggaagtatgggggaccgcctccagattccgtttattcaggtcagcagccttctgtt
ggcactgagatatttgtggggaagatcccaagagatctatttgaggatgagcttgttcca
ttatttgagaaagctggacctatatgggatcttcgtctaatgatggatccgctcactggt
ctcaatagaggttatgcgtttgtcactttttgtacaaaagaagccgctcaagaggctgtt
aaactgtataataatcatgaaattcgttctggaaaacacattggtgtctgcatctcagtt
gccaacaataggctttttgtgggctctattcctaaaagtaaaaccaaggaacagattctt
gaagaattcagcaaagtaacagagggtcttacagacgtcattttataccaccaaccggat
gacaagaaaaaaaacagaggcttttgctttcttgaatatgaagatcacaaaacagctgcc
caggcaaggcgtaggttaatgagtggtaaagtcaaggtctggggaaatgttggaactgtt
gaatgggcagatcctatagaagatcctgatcctgaagttatggcaaaggtaaaagtgctg
tttgtacgcaaccttgccaataccgtaacagaagagattttagaaaaggcatttagtcaa
tttgggaaactggaacgagtgaagaaactaaaagattatgctttcattcattttgatgaa
cgagatggtgctgtcaaggctatggaagaaatgaatggaaaagacttggagggagaaaat
attgaaattgtttttgctaagccaccagatcagaaaaggaaagaaagaaaagctcagagg
caagcagcaaagaatcaaatgtatgatgattactactattatggtccacctcatatgccc
cctccaacaagaggtcgagggcgtggaggtagaggtggttatggatatcctccagattat
tatggatatgaagattattatgattattatggctatgattaccataactatcgtggtgga
tatgaagatccatactatggttatgaagattttcaagttggagctagaggaaggggtggt
agaggagcaaggggtgctgctccatccagaggtcgtggggctgctcctccccgaggtaga
gccggttattcacagagaggaggtcctggatcagcaagaggcgttcgtggtgcgagagga
ggtgcccaacaacaaagaggccgcggggtacgtggtgcgaggggtggccgcggtggaaat
gtaggaggaaagcgcaaagctgatgggtacaaccagccagattccaagcggcgccagacc
aataatcagaactggggctcccaacccattgctcagcaaccgctccaagggaaaaggggt
cgaggccggtcctga
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