Sciurus carolinensis (gray squirrel): 124988527
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Entry
124988527 CDS
T08117
Name
(RefSeq) vesicle-trafficking protein SEC22b
KO
K08517
vesicle transport protein SEC22
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04130
SNARE interactions in vesicular transport
ncar04145
Phagosome
ncar05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124988527
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124988527
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
124988527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124988527
Membrane trafficking [BR:
ncar04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
124988527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Sec20
Motif
Other DBs
NCBI-GeneID:
124988527
NCBI-ProteinID:
XP_047414024
EnsemblRapid:
ENSSCRG00010002974
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All DBs
Position
1:complement(101703954..101721154)
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AA seq
215 aa
AA seq
DB search
MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQSPTRCTLEAGAMT
FHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQ
KTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKY
RQDAKYLNMRSTYAKLAAVAVFFIMLIVYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtgttacttacgatgattgcccgagtggcagacgggctcccgctggccgcctcgatg
caggaggacgaacagtctggccgggaccttcaacagtatcagagccaggctaagcaactc
tttcgaaagttgaatgaacagtcccctaccaggtgtaccttggaagcaggagccatgact
tttcactacattattgagcagggagtgtgttatctggttttgtgtgaagctgcctttcct
aagaagttggcttttgcctacctagaagatttgcactcagaatttgatgaacagcatggg
aaaaaggtgcccactgtgtctagaccttattcctttattgagtttgataccttcattcag
aaaaccaagaagctctacattgacagtcgtgctcggagaaacctaggctccatcaacact
gaattgcaagatgtacagagaatcatggtggccaatattgaagaagtgttacaacgaggt
gaagcactctcagcattggattcaaaggccaacaatttgtccagtctgtccaagaaatac
cgccaggatgcgaagtacttgaacatgcgttccacttatgccaaacttgcagccgtagct
gtatttttcatcatgttaatagtgtatgtgcgattctggtggctgtga
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