Sciurus carolinensis (gray squirrel): 124988601
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Entry
124988601 CDS
T08117
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124988601
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124988601
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124988601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-Tbcl_FmdE
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
124988601
NCBI-ProteinID:
XP_047414177
LinkDB
All DBs
Position
7:127867297..127885319
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AA seq
513 aa
AA seq
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MASGSVAECLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGSHGHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctacagcaggagaccacttgccccgtgtgtctg
caatacttcgtcgagcccatgatgctcgattgtggccacaacatctgttgcgcgtgcctc
gcccgctgctggggcgcagcggagactaacgtgtcgtgcccgcagtgccgagagaccttc
ccgcagcggcatatgcggcccaaccggcatctagccaacgtgacccagctggtgaagcag
ctgcgcaccgagcgaccgtcagggcccggcggcgagatgggcgtgtgtgagaagcaccgc
gagcctctgaagctgtactgcgaggaggaccagatgcccatctgcgtggtgtgcgaccgc
tcccgcgagcaccgcggccacagtgtgctgccgcttgaggaggcggtggagggcttcaag
gaacaaatccagaaccaactggaccatctaaaaagagtaaaagacttaaagaagagacgc
cgggcacagggggagcaggcacgagctgaactcttgagcctgacccagatggagagagag
aagattgtttgggagtttgaacagctgtatcactccttgaaggaacatgagtatcgcctc
ctggcccgccttgaggaactagacttggccatctacaacagtatcaatggtgccatcacc
cagttctcttgcaacatctcccatctcagcagcctgattgcccaactagaagaaaagcag
cagcagcccaccagggagctcctgcaggacatcggggacacattaagcagggctgaaaga
atccggatcccagaaccttggatcacacctccagatctgcaagagaaaatccacattttt
gcccaaaaatgtctattcttgacggagagtctgaagcaattcacagaaaaaatgcaatca
gatatggagaaaatccaagaattgagagaggctcagttatactcagtggacgtgactctg
gatccagacacagcctaccccagcttgatcctttctgataatctgcggcaggtgcgatac
agttacctccaacaggacctgcctgacaaccctgagcggttcaatctttttccctgtgtc
ttgggctctccatgtttcatcgctgggagacattattgggaggtagaggtgggagataaa
gccaagtggaccataggtgtctgtgaagactcagtatgcagaaaaggtggagtaacctca
gccccccagaatggattctgggcagtgtcattgtggtatgggaaagaatactgggcactt
acttccccaatgactgcccttcccctgcggacccctctccagcgggtgggaattttcttg
gactatgatgctggtgaggtctccttctacaatgtgacagagaggtgtcacacctttact
ttctctcatgctaccttctgtgggcctgtccggccctacttcagtctgagttactcggga
gggaagagcgcagctcctctgatcatctgccccatgagtgggatcgatgggttttctggc
catgttggaagtcatggtcattccatggagacctccccttga
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