Sciurus carolinensis (gray squirrel): 124988622
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Entry
124988622 CDS
T08117
Name
(RefSeq) synaptojanin-2 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00562
Inositol phosphate metabolism
ncar01100
Metabolic pathways
ncar04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
124988622
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
124988622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124988622
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
124988622
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
124988622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Sgo0707_N2
Motif
Other DBs
NCBI-GeneID:
124988622
NCBI-ProteinID:
XP_047414219
EnsemblRapid:
ENSSCRG00010008855
LinkDB
All DBs
Position
7:complement(9532117..9613998)
Genome browser
AA seq
1499 aa
AA seq
DB search
MALSKGLRLLARLEATGESSVLLEARGRGDCLLFEAGTVATLAPEEKEVIKGQYGKLTDA
YGCLGELRVKSGGASLSFLVLVTGCTSVGRIPDAEIFKITATDFYPLQEEAKEEDRLLAL
RKILSSGVFYFACPNDGSRFDLTVRAQKQGDDRSEWGNAFFWNQLLHVPLRQQQVSCCDW
LLKVICGVVAIRTVYASHKQAKACLISRVSCERAGARFHTRGVNDDGHVSNFVETEQTIY
MDDGVSSFVQIRGSVPLFWEQPGLQVGSHHLRLHRGLEANAPAFDRHMVLLKEQYGKQVV
VNLLGSRGGEEVLNRAFKKLLWASCHAGDTPMINFDFHQFAKGGKLEKLENLLRPQLKLH
WDDFDVFTKGENVSPRFQKGTLRMNCLDCLDRTNTVQSFIALEVLHLQLESLGLDSKPIV
DRFVESFKAMWSLNGHSLSKVFTGSRALEGKAKVGKLKDGARSVSRTIQSNFFDGVKQEA
IKLLLVGDVYSEESTDKGRMLLDNTALLVTPKILKAMTERQSEFTNFKRIQVAVGTWNVN
GGKQFRSNLLGTAELTDWLLDAPRLSGAADIQDDSSPADIYAVGFEEMVELSAGNIVNAS
TTNRKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVKTGMGG
KAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYREITHKLSFPAGRNVFSHDY
VFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHEGAINFGPTY
KYDVGSAAYDTSDKCRTPAWTDRVLWWRKKRPFDKTAGELNLLDSDLDGGTKVRHTWSPG
TLRYYGRAELQASDHRPVLAIVEVEVQEVDVGARERVFQEVSSFQGPLDATVVVNLQSPT
LEEKSEFPEDLRAELMQTLGNFGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRA
VKIRPKTKDWLKGLREELIRKRDSLAPVSPTANSCLLEENFDFTSLDYESEGDVLEDDED
YLVDELGQPVVSDSELVGDDPPDAPSTATVAPASKSPALTKKQHPTYKDDADLVELEREL
GAVGDLRHRSPSRSLSVPSRPRPPHPPQRPPPPTGLMVKKSASDASISSGTHGQYSILQT
AKLLPGAPRQPPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEARGGTPEEAFNALALR
DQRASKTEPSPGEAHPEPSQVPPLLPRRPAPRVPAIKKPTLRRTGKPVSPEEQFEQQPVH
FIVGAPETSLEAPLLASAPRVPPVPKPRTLQPRKGAERRPSGGKPVPADDAPLVAGATVP
PASEAPSLVPKVPPRRKKSAPAAFHLQVLQSHSQLLQDLTCSSSGGSCPSRHQPDADTFF
PQVGFLGTTSATSPEMDGPRVTKPEAASLLGDYQDPFWNLLQHPKLLTNTWLSKSSGPLA
VGARNPERAPTDPAQASASEAAEGEMPLDHGGEPFDHWVTISDKDKRTTLQVFDPLAKT
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggccctgagcaaaggcctgcggctgctggcgcgcctggaggccacgggcgagagcagc
gtgctgctggaggcgcgcggccgcggcgactgcctgctcttcgaggccggcacggtggcc
acgctggctccggaagagaaggaagtcattaagggacagtatggcaagctcacggacgcg
tacggctgcctgggggagctcagggtgaagtctggtggcgcttccctgagcttcctggtg
ttggtgacaggctgcacgtcggtgggcagaattccagatgcagaaatcttcaaaatcacc
gccacggatttttaccctctccaggaggaggccaaggaggaggaccggctgctggccttg
aggaagatcctcagctccggggtgttctactttgcgtgccccaacgacggctcccgcttt
gacctgaccgtgcgggcgcagaagcagggcgatgaccgctctgagtgggggaacgccttc
ttctggaaccagctgctgcatgtgcccctgaggcagcagcaggtgagctgctgtgactgg
ctgctgaaggtcatctgcggcgtggtggccatccgcacagtgtacgcatcgcacaagcag
gccaaggcctgcctcatctctcgcgtcagctgcgagcgcgccggcgcccgcttccacact
cgaggcgtgaacgacgatggccacgtgtccaacttcgtggagacagagcagacgatctac
atggatgatggagtgtcgtccttcgtccagatcagaggctctgttccgctgttttgggag
caaccagggcttcaggtgggctcccaccatctgaggctccacagaggcctggaggccaac
gcccctgctttcgacaggcacatggtacttctgaaggagcagtacgggaagcaggtggtc
gtgaacctgctgggcagcagaggcggagaggaggtgctcaacagggcctttaagaagttg
ctctgggcttcttgccatgctggcgacacgcctatgataaattttgacttccatcaattt
gccaaaggcgggaagctagagaaattggagaacctgttgaggcctcagttaaagctacac
tgggatgactttgacgtgttcaccaagggcgagaatgtaagtccacgttttcagaaaggc
actttgcggatgaactgtcttgactgcctggaccgaaccaacaccgtgcagagcttcatc
gcacttgaggtccttcatctgcagctcgagagcctggggctggattcaaaacccatcgtt
gaccgctttgtggagtccttcaaagccatgtggtctctgaatgggcacagcctgagcaag
gtgttcacgggcagcagggccctggaagggaaggccaaggtggggaagctgaaagatggg
gcccggtctgtgtctcgcaccatccagtccaacttctttgatggggtgaagcaggaggcc
atcaagttgctgctggttggagatgtctacagtgaggagtcaacagacaaagggaggatg
ctcctggacaacacggcccttctggtgacccccaagatcctgaaagctatgacagagcgt
cagtcagaattcaccaacttcaagcggatccaagtcgccgtggggacctggaatgtgaat
ggagggaaacagttccgcagcaacctcctggggacagcagagctcacagattggctgctg
gatgcaccccggctctctggggctgccgacatccaggacgatagcagcccagctgacata
tatgccgtggggttcgaagagatggtggagctgagtgcagggaatattgtcaacgccagt
accaccaacaggaagatgtggggcgagcagcttcagaaagccatctcgcgctcgcatagg
tacattctcttgacttcggcacagctagtgggcgtctgtctttatatctttgtacgtccg
taccatgttcccttcatcagggacgtggccatcgacacggtgaagactggcatgggcgga
aaggcggggaacaagggcgccgtgggcatccgctttcagttccacagcaccagcttctgc
ttcatctgcagccacctgacagctgggcagtcgcaggtgaaggagaggaacgaggactac
agggagatcacccacaagctctccttccctgcggggaggaacgttttttctcatgattat
gtgttttggtgtggcgatttcaactaccgaattgatctcacttatgaagaagtcttctac
tttgttaaacgccaagactggaagaaacttctggaattcgatcagctacaactgcagaaa
tcaagtggaaaaatttttaaagactttcatgaaggcgccattaattttggacccacgtat
aagtacgatgtgggctctgctgcctacgacaccagtgacaagtgccgcaccccagcctgg
acagacagggtgctgtggtggaggaagaagcgtccttttgataaaacagccggagaactc
aatcttcttgacagtgacctagatggaggcaccaaagtcaggcacacctggtctcccggg
accctcaggtactatggccgtgcggagctgcaagcgtctgatcacagacccgtgctggcc
attgtggaggtagaagtacaagaagtcgacgtgggcgctcgggagagggttttccaggaa
gtgtcctctttccagggccctctggacgccactgttgttgtaaacctccagtcaccaacc
ctagaagagaaaagcgagtttcccgaggacctgcgggctgaactcatgcagaccttgggg
aactttgggaccatcgtgcttgtcaggatcaaccaaggacagatgctggtgacatttgca
gacagtcactcagccctcagcgtcctggatgtggatggtatgaaggtgaaaggcagagcg
gtgaagatcagaccgaagacaaaggactggctgaaagggttgcgagaggagctcattcga
aaacgggacagcctggctcctgtgtcccccacggccaattcctgtttgctagaggaaaac
tttgacttcacaagcctggactatgagtcagaaggggatgttctcgaagatgatgaagac
tatttggtggatgagctcgggcagcctgtggtctcagacagtgaactggtgggagacgac
cctcctgatgcccccagcactgcaacggtggcacctgccagcaagtcgcctgcactaacc
aaaaagcagcacccgacgtacaaagacgatgctgacctggtggagttagagcgggagctg
ggagccgtcggggatctccgccaccgttctccaagcaggtctctgtcagttcccagcagg
cctcggccgcctcacccaccgcagagacccccccctccaactggtttaatggtgaaaaag
tcagcttccgatgcgtccatctcctcgggcacccacgggcagtattcaatcttgcaaacg
gcaaaacttttgcctggagcaccccggcaaccgcccaaagctcggactggaataagtaag
ccttacaatgtcaagcagatcaaaaccaccaatgctcaggaggcagaagcagccatccga
tgtctcctggaagccagaggaggtactccagaagaagccttcaatgccctggccctgaga
gaccaaagagcttccaaaacagagcccagccctggggaggcccaccccgagccctcccag
gtgcccccactcctgccccggcggccggcacccagggttcctgccatcaagaagccaacc
ttgagaaggacaggaaagcccgtgtcaccagaagaacagtttgagcagcagcctgtccat
tttatagtgggcgccccagagacgagccttgaagcccctcttctagcttcagcccctcga
gttcctcctgttcccaagccgagaacattgcagcccaggaaaggtgccgagaggaggccc
agcggtggaaagccagtgccagcagacgacgcgcctctcgtggcaggagccacggtgcca
cccgcttcagaagctccatctctggtgcccaaggtgcccccgaggaggaagaagtcggca
ccagcagccttccacctgcaggtcctgcagagccatagccagcttctccaagatctcacc
tgcagcagcagtggcggcagctgtccgtcccgacaccagcctgacgctgacactttcttt
ccgcaagtgggttttcttggcactacgtctgccacaagccccgaaatggatggccccaga
gttacgaagccagaggcagcctcccttcttggtgattatcaggatcccttctggaacctt
ctccagcaccctaagctgttgactaatacctggctttccaagagctctggtcctttggct
gtaggggccaggaaccctgagagggcacccacagacccagcacaggccagcgcttcagaa
gcggctgagggcgagatgccactagaccatgggggagaaccctttgatcactgggtgacc
atcagtgacaaagacaagaggacaacactgcaggtgtttgacccactggcaaaaacatga
DBGET
integrated database retrieval system
