Sciurus carolinensis (gray squirrel): 124988623
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Entry
124988623 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: ATP synthase subunit alpha, mitochondrial-like
KO
K02132
F-type H+-transporting ATPase subunit alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00190
Oxidative phosphorylation
ncar01100
Metabolic pathways
ncar04714
Thermogenesis
ncar05010
Alzheimer disease
ncar05012
Parkinson disease
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05020
Prion disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05208
Chemical carcinogenesis - reactive oxygen species
ncar05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
124988623
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
124988623
09160 Human Diseases
09161 Cancer: overview
05208 Chemical carcinogenesis - reactive oxygen species
124988623
09164 Neurodegenerative disease
05010 Alzheimer disease
124988623
05012 Parkinson disease
124988623
05014 Amyotrophic lateral sclerosis
124988623
05016 Huntington disease
124988623
05020 Prion disease
124988623
05022 Pathways of neurodegeneration - multiple diseases
124988623
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
124988623
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Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
ATP-synt_ab_C
ATP-synt_ab_N
DUF4142
Motif
Other DBs
NCBI-GeneID:
124988623
NCBI-ProteinID:
XP_047414224
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Position
7:complement(89260227..89262074)
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AA seq
553 aa
AA seq
DB search
MLSVCIAAAVARTLPQRAGMVSKNALGSSFIAARNLHASNTHLQNIGTAEMSSILEERIL
GADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFG
NDKLIKEGDIXKRTGAIVDVPVGEELLGRLVVALGNAIDGKGPIGSKTRRRVGLKTPGII
PQISVREPMQTGIKAVDSLVPIGHGQCELIIGDRQTGKTSIAIDTIINQKCFNDGSDEKK
KLYCIYVAIGQKXSTVAQLVKRLTDADAMKYTIVVSATASDAVPLQYLAPYSGCSMGGYF
RDNGKHALIIYDDLSKQAVVYHQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFG
GGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSA
AQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMA
IEEQVAVIYAGVRGYLDKLEPSKITKFENAFLSHVISQHQALLGNIRADGKISEESDAKL
KEIVTNFLAGFEA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgtgtgcatcgccgcggcagtggcccgcaccctccctcagcgggccgggatg
gtctccaaaaatgctttggggtcatcctttattgctgcaaggaacctccatgcttctaac
acccatcttcagaatattggcactgctgagatgtcctctattctcgaagagcgtattctt
ggagctgatacctctgttgaccttgaagaaactggtcgtgtcttaagtattggtgatggt
attgcccgagttcatgggctgaggaatgttcaagcagaagaaatggtagagttttcttca
ggcttaaagggtatgtctctcaacttggaaccggacaatgttggtgttgtcgtgttcggg
aatgataaactaatcaaagaaggagatatcntaaagaggacaggagccattgtggatgtt
ccagttggcgaggagctgttgggtcgtttagtagttgcccttggtaatgccattgatgga
aagggtccaattggttccaagacccgtaggcgagtgggcctgaaaacccctggaatcatt
cctcaaatctctgtgagggaaccaatgcagactggcattaaggctgtggatagcttggtg
ccaattggacatggtcagtgtgaactgattattggtgacagacagaccgggaaaacatcc
attgctattgacacaattattaatcagaaatgtttcaatgatggatctgatgaaaagaag
aagctgtattgtatctatgttgctattggtcaaaagtgatccactgttgcccagttggtc
aagagacttacagatgcagatgctatgaagtacaccattgtggtgtcagccactgcttct
gatgctgtcccacttcagtacctggctccgtactctggctgttctatgggaggatatttt
agagataatggcaaacatgctttgatcatctatgatgacttatccaaacaggctgttgtg
taccatcagatgtccctgttgctgcgccgtccccctggccgtgaggcctatcctggtgat
gtgttctacctacactcccgactgctagagagagcagccaaaatgaatgattcctttggt
ggtggctccttgactgctttaccagtcatagaaacacaggctggtgatgtgtctgcttac
attccaacaaatgtcatttccatcaccgatggacagatcttcttggaaacagaattgttc
tataaaggtattcgccctgctattaacgttggtttatctgtgtcccgtgtcggatctgct
gcccaaaccagagctatgaagcaggtggcaggtaccatgaagctggagttggctcagtat
cgtgaggttgctgcttttgcccagtttggttctgatcttgatgctgccactcaacaactc
ttgagtcgtggcgtgcgtctgactgagttgctgaagcaaggacagtattctcccatggct
attgaagaacaagttgctgttatctatgcgggtgtaagagggtatcttgataaactggaa
cccagcaagatcacaaagtttgagaatgctttcttgtctcatgtgatcagtcaacaccaa
gccctcttgggcaacatcagggctgatggaaagatctcagaagagtcagatgcaaagctg
aaagagattgtaacaaacttcttggctggatttgaagcataa
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