Sciurus carolinensis (gray squirrel): 124988634
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Entry
124988634 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38-like
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124988634
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124988634
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124988634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
Trm112p
ANCHR-like_BBOX
Zn_ribbon_FGT1_2
Phage_GP20
DUF1664
XLF
Motif
Other DBs
NCBI-GeneID:
124988634
NCBI-ProteinID:
XP_047414238
LinkDB
All DBs
Position
7:154358825..154370524
Genome browser
AA seq
461 aa
AA seq
DB search
MALSSFTKKMKEIATCSICMSLMTHPVTISCGHSYCNSCLQYSYNGQAPSGRRRFCCPLC
RSSFPLTNHGYNKVLENLIEVIGEMDLELLCGEHGEQLHLFCEDEGQLICWRCERSPRHA
GHTTALVEDACQGYKEQLQNVITKLSQLHEECTNQKAFVTKQITEWKEKIEIQRQNIKSD
FKNLQIFLCLEEKSYLWRLEREEEEMLWRLRASEARLKQKSDELRSHILELEAKCQSSSQ
KLLQDVKDTLSRSRVERLETPEAFSMEIHTTCNVSELYFDVKKILRRCQVGVTLDPDTAH
PNLTLSEDGRQVTHGGCQEDLDFSPRRFSAFPCVLGCEGFTSGRHYFEVDVGEGTGWDLG
VCMENVPRDADVKQEPEFGFWTIRLCKGDYLALTNPPTPLSLREQPLVVGIFLDYEIGIV
SFYNTTAGSHIFTFPNASFLYTLKPYFRVYQHSPLFLPPPE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccctctcctcattcacaaagaagatgaaagaaatcgccacctgctccatctgcatg
agcctgatgacgcatcccgtgaccatcagctgtgggcacagctactgcaactcgtgcctg
cagtactcctacaacggccaggccccatcagggcggcggaggttctgctgccctctctgc
cggtcctcatttcctctgacgaaccacgggtacaacaaggttctggaaaacctcatcgag
gtcatcggggagatggacctggagttgctgtgcggggaacacggggagcagctgcacctc
ttctgcgaggacgagggccagctcatctgctggcgctgtgagcggtcaccgcggcatgca
gggcacaccacggctcttgtggaagacgcctgccagggctacaaggaacaactccagaat
gttataacaaaattgagtcaactccatgaggaatgtacaaatcagaaggcattcgtgaca
aagcaaataactgaatggaaggagaagatagagattcagagacaaaacatcaagtctgac
tttaagaatctccagattttcctgtgtctggaggagaagtcatatctttggaggctggag
agggaagaggaggagatgctgtggaggctgagggcgagcgaggccagactgaagcagaag
agcgatgaactcaggagccatattctggagttggaggcaaaatgtcagagctcatcccag
aagttgctgcaggatgtgaaagacaccttgagcaggagccgggtggagaggctggagaca
ccagaggccttttccatggagattcataccacctgcaatgtttctgagctctactttgat
gtgaagaaaatactaagacgttgtcaagttggtgtgaccctggatccggacacagctcac
ccgaacctaactctgtcagaggacggaagacaggtgactcacgggggttgccaggaggat
ctcgacttttctcccaggagattcagtgccttcccctgtgtcctgggctgtgagggcttc
acctcagggagacactactttgaagtggatgttggagaagggactggttgggatttgggg
gtctgtatggaaaatgtgcctagggatgctgatgtgaagcaggagcctgagtttggcttc
tggaccatcaggctgtgcaaaggggactacctagcacttaccaatcccccaactcctctg
agtctgcgtgagcagcccctggttgtgggaatttttctggactatgagattggaattgtg
tccttctacaacacgactgctggctcccacatcttcacgttccccaacgcctccttcttg
tacactctcaagccctacttccgtgtttatcagcattctcctttgttcctgcctccccca
gagtag
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integrated database retrieval system
