Sciurus carolinensis (gray squirrel): 124988695
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Entry
124988695 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: exportin-5-like
KO
K14289
exportin-5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124988695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124988695
03036 Chromosome and associated proteins [BR:
ncar03036
]
124988695
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124988695
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
124988695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
124988695
NCBI-ProteinID:
XP_047414348
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All DBs
Position
7:112319517..112364868
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AA seq
1205 aa
AA seq
DB search
MAMDQVNALCEQLVKAVTVMMDPSSTQRYRLEALKFCEEFKEKCPICVPCGLRLAEKTQI
AIIRHFGLQILEHVVKFRWNSMSRLEKVYLKNSVMELIANGTLNILEEENHIKDVLSRIM
VEMIKREWPQHWPDMLMELETLSRLGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQ
TLTQKMERIFSFLLNTLQENVNKYQQMKTDTSQESKAQANCRVGVAALNTLAGYIDWVSM
SHITAENCKLLVILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYIL
SAAQTADGGGLIEKHYVFLKRLCQVLCALGNQLCALLGIDSDVETPVNFGKYLESFLAFT
THPSQFLRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCE
YSRFDFDSDEDFNAFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWLKYQLSTSVDAGPMN
SCSPTAGTGEGGLCSIFSSSFVQWEAMTFFLESVINQMFRTLEKEEIPINDGIELLQMVL
NFDTKDPLILSCVLTNVSALFSFVTYRPEFLPQVFSKLFSSVTFETVEENKAPRTRAVRN
VRRHACSSIIKMCRDYPELVLPNFDMLYNHVKQLLSNELLLTQMEKCALMEALVLISNQF
KNYERQKLFLEELMAPVASIWLSEDMHRVLSDVDXFIAYVGADLKSCDPALEDPCGLNRA
RMSFCVYSILGVVKRTCWPADLEEAKAGGFVVGYTPSGNPVFRNPCTEQILKLLDNLLAL
IRTHNTLYAPEMLAKMAEPFTKALDMLEAEKSAILGLPQPLLELNDYPVYKTVLERMQRF
FSTLYENCFHILGKAGPSMQQDFYTVEDLATQLLGSAFVNLNNIPDYRLRPMLRVFVKPL
VLFCAPEHYEALVSPILGPLFTYLHMRLSQKWQVINQRSLLCGEDETVEENPESQEMLEE
QLVRMLTREVMDLITVCCVSKKGADHNTAPPADGDDEEMMATEVTPSAMAELTDLGKCLM
KHEDVCTALLITAFNSLSWKDTLSCQRTTTQLCWPLLKQVLSGTLLADAVTWLFTSVLKG
LQTHGQHDGCMASLVHLAFQIYEALRPRYLEIRAVMEQIPEIQKDSLDQFDCKLLNPSLQ
KVADKRRKDQFKRLIAGCIGKPLGEQFRKEVHIKNLPSLFKKTKPMLETEVLDNEGGSLA
TIFEP
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatcaagtgaacgcgctgtgcgagcagctggtgaaagcggtgaccgtcatg
atggaccccagctccacccagcgctaccggctggaagccctcaagttttgtgaagaattt
aaagaaaagtgccccatctgtgtcccctgtggcttgaggttggctgagaaaacacaaatt
gccatcatcagacattttggtcttcaaatcctggaacatgttgtcaagtttcggtggaac
agcatgtctcgattagagaaggtctatctgaagaacagtgtcatggagctgatcgcaaac
ggaacattgaacattttggaagaggagaaccacattaaagatgttctatctcgaattatg
gtagagatgattaagcgagagtggccacagcactggcctgacatgctgatggagttggag
actctctctagacttggggaaacacaaacagaattagtgatgttcatccttttgcgactg
gcagaggatgtagtgacctttcagacacttcctcctcaaagaagaagggatatccagcaa
acattaacccagaaaatggaaaggatcttcagttttctacttaacacacttcaggaaaat
gtaaacaagtaccagcaaatgaagacagatacttctcaggagtcaaaggctcaagcaaac
tgtcgagtaggagttgcagcactgaatactctagcaggctacattgactgggtgtctatg
agtcacattactgcagaaaactgtaaactcctggtgatactatgcctgctcctgaatgaa
caggaacttcaattgggagctgctgagtgtcttctcattgcagtcagcagaaaaggaaaa
ttagaggaccggaaacccttgatggttttatttggagatgttgccatgcattatatacta
tctgctgcacagactgccgatggaggaggcttgatagaaaaacactatgtcttcctgaag
agactctgtcaggtgttgtgtgcactgggcaatcagctgtgtgccttgctgggcatagat
tctgatgtagaaacaccagtgaattttggaaaatatctggaatcttttcttgcttttaca
actcacccaagtcagtttctacgctcttcaactcagatgacttggggagccctcttccga
catgagatcctatcccgtgatcctttgctgttagcaataataccaaaatatcttcgtgct
tctatgaccaatttggtcaagatgggctttccttctaagacagatagtcctagctgtgaa
tattctcgatttgattttgatagtgatgaggacttcaatgctttcttcaactcatcccga
gcccagcaaggagaagtgatgagattggcatgtcgtttagatcccaagactagtttccag
atggctggggagtggctaaagtatcagctatcaacttcagttgatgctggacctatgaac
tcctgttctcctacagctggaactggagagggaggcctgtgctccattttctcatcgtca
tttgtgcagtgggaagctatgactttttttttggaaagtgtgatcaaccagatgtttcga
acactagagaaagaagaaattccaattaatgatggaatagagctgttgcagatggtcttg
aactttgacaccaaggatcctctcatcctgtcctgtgtcctcactaacgtctcagcactc
ttttcatttgttacctacaggccagagttcctgccccaggtcttctctaagctattttca
tctgtcacttttgaaactgttgaagaaaataaggcccccagaacccgggcagtgaggaat
gtgaggaggcatgcttgttcctccatcatcaagatgtgccgtgactaccctgagcttgtg
ctgcccaattttgatatgctttataaccatgtgaagcagcttctctccaatgagctactc
ctgacacaaatggagaaatgtgccctcatggaagccctggttctcattagcaaccaattc
aagaactatgaacgtcaaaagttattcctagaggagttgatggcaccggtggccagcatc
tggctgtctgaagacatgcacagagtgctgtcagatgttgatngctttattgcctatgtg
ggtgcagatctcaaaagctgtgacccagccctggaggatccctgtggcttgaaccgtgca
cgaatgagcttttgtgtgtatagcattttgggtgttgtgaagcgaacctgctggcctgct
gacctagaagaggccaaagctgggggatttgtagtgggttatacacccagtggaaatcca
gtcttccgtaacccctgcacagagcagattctgaaacttcttgacaatttacttgccctt
ataagaacccacaatactttgtatgcaccagaaatgctagccaaaatggcagagcctttc
actaaggctctggatatgcttgaagcggagaagtctgctatcttaggattacctcagcct
ctcttggaactcaatgactatcctgtctataaaacagtcttggaaagaatgcagcgtttc
ttcagcaccctctatgaaaactgtttccatatcctagggaaggctggcccttccatgcag
caagacttctacaccgtggaggaccttgctacccagctccttggctcagccttcgtcaac
ttgaacaatattcctgactaccgactcagacccatgcttcgggtgtttgtgaagcctctg
gtgctcttctgtgccccagagcactacgaagccctggtatctcccatccttggacctctt
ttcacctacctccacatgaggctttcccagaaatggcaagtcatcaaccagaggagccta
ctgtgtggagaagatgaaactgtggaggaaaacccagagtctcaagaaatgctggaggaa
caactggtgaggatgttaacccgagaagtcatggacctaatcacggtttgctgtgtatca
aagaaaggtgctgaccacaatactgctccccctgcagatggagatgatgaggagatgatg
gccacagaggtaaccccttcagctatggcggagcttacagacctgggaaaatgtctgatg
aagcatgaggatgtttgcacagcactgttaattacagccttcaattccctatcttggaag
gatactctctcttgccagaggacaaccacgcagctctgctggcctctcctcaaacaagtg
ctgtcagggacactgctcgcagatgccgtcacgtggcttttcaccagtgtgctgaaaggt
ttacagacacatgggcagcatgacgggtgcatggcttccctggtccacctggcattccag
atatatgaggcactgcgccccaggtacctggagattagagctgtgatggagcaaattcca
gaaatacagaaggactctctggaccagtttgactgcaaacttttgaacccttccctgcag
aaggtggctgacaagcgacggaaggaccaattcaaacgcctcattgctggttgcatcggg
aaacccttgggagagcaattccgaaaagaagttcacattaagaatcttccctcgcttttc
aaaaaaacaaagccaatgctggagacagaggtgctggacaatgaggggggcagcctggcc
accatctttgaaccatga
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integrated database retrieval system
