Sciurus carolinensis (gray squirrel): 124988704
Help
Entry
124988704 CDS
T08117
Name
(RefSeq) Golgi-associated PDZ and coiled-coil motif-containing protein isoform X1
KO
K24054
golgi-associated PDZ and coiled-coil motif-containing protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124988704
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
124988704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF6288
DUF903
NPV_P10
DUF6212
bZIP_2
Motif
Other DBs
NCBI-GeneID:
124988704
NCBI-ProteinID:
XP_047414364
LinkDB
All DBs
Position
7:46535846..46581134
Genome browser
AA seq
463 aa
AA seq
DB search
MSAGGPCPAGAGGGPGGASCAVGVSPGGVSMFRWLEVLEKEFDKAFVDVDLLLGEIDPDQ
ADITYEGRQKMTSLSSCFAQLCHKAQTVSQINHKLEAQLVDLRSELTETQAEKVVLEKEV
HDQLLQLHSVQLQLHAKTGQSVDSGTIKAKLSVPSMEELERELEANKKEKVKEAQLEAEV
KLLRKENEALRRHIAVLQAEVYGARLAAKYLDKELAGRVQQIQLLGRDMKGPAHDKLWNQ
LEAEIHLHRHKTVIRACRGRNDLKRPMQAPPGHDQDSLKKSQGVGPIRKVLLLKEDHEGL
GISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ
RGEIEFEVVYVAPEVDSDDENVEYEDESGHRYRLYLDELEGGGNSGASCKDTGGEIKVLQ
GYSKKAVTEAHENGDMGTSSETLQDDSASKLDDLHSLYHKKSY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggcccatgcccggcaggagccggagggggcccagggggcgcctcctgc
gctgttggggtctcccccggcggggtatccatgttccggtggctggaggtgctggagaag
gagttcgacaaggcctttgtggatgtggatctgcttctgggagagattgatccggaccag
gcagacatcacttatgaggggcgacagaagatgaccagcttgagctcctgctttgcgcag
ctttgccacaaagcccagactgtgtcccaaatcaaccacaagctagaggcacaattggtg
gatctaagatctgagttgacagagacccaagcagagaaagttgtattggagaaagaagtg
catgatcaacttttacagttgcactctgttcagcttcagcttcatgctaaaactggtcaa
agtgttgactctggtaccattaaggcaaaattgtctgtcccctctatggaggagctggaa
agagagcttgaagcaaacaaaaaagaaaaggtaaaagaagctcaacttgaagctgaagtg
aaattgttgagaaaagagaatgaagcccttcgtagacatatagctgttctccaggctgaa
gtttatggggcaagactggctgccaaatacttggataaggaactggcaggaagggtccaa
caaatacagttactaggacgagatatgaaaggacctgctcatgataaactgtggaaccaa
ttagaagctgaaatacatttgcatcgtcacaaaactgttatcagagcctgtagaggacgt
aatgacttgaaacgacccatgcaagcaccaccaggccatgatcaagattccttgaagaaa
agccaaggagttggtccaattaggaaagttctcctcctcaaggaagatcacgaaggcctt
ggcatttcaattacaggtggaaaagaacatggtgttcccatcctcatctctgagatccat
ccagggcaacctgctgatagatgtggagggctgcacgttggggatgctattttggcagtc
aatggagttaacctaagggacacaaaacataaagaagctgtaaccatactttctcagcag
agaggagaaattgagtttgaagtagtttatgtggctcctgaagtggattctgatgatgaa
aatgtagagtatgaagatgagagtggacatcgttatcgtttgtaccttgatgaattagag
ggaggtggtaattctggtgctagttgcaaagacacaggtggggaaatcaaagtgttacaa
ggatatagtaagaaggcagtaactgaggcacatgaaaatggagacatgggaacttcaagt
gaaacgctgcaagatgacagtgcttcaaaattagatgatctgcacagtctgtatcataaa
aaatcttattaa
DBGET
integrated database retrieval system
