Sciurus carolinensis (gray squirrel): 124988771
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Entry
124988771 CDS
T08117
Name
(RefSeq) small conductance calcium-activated potassium channel protein 3 isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04911
Insulin secretion
ncar04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
124988771
04929 GnRH secretion
124988771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124988771
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
124988771
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
Nuf2_DHR10-like
DUF6775
MbeD_MobD
Motif
Other DBs
NCBI-GeneID:
124988771
NCBI-ProteinID:
XP_047414477
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Position
1:94996190..95155684
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AA seq
721 aa
AA seq
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MDTSGHFHDSGVGDLDEDPKCPCPSSGDEQQQQQQQQPPPPAPPAAPQQPPGPSLQPQPQ
PPQIQQQQQQPPHPLSQLAQLQSQLVHPGLLHSPPTAFRAPTSSNSTAILHPSSRQGSQL
NLNDHLLGHSPSSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSR
LSASRRNLIEAEPEGQPLQLFSPSNPPEIVISSREDNHAHQTLLHHPNATHNHQHAGTTA
SGTTFPKANKRKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGLYS
KDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEM
LVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFT
DASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDV
TSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTK
AEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQ
LRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASF
NSLPLLIADTLRQQQQQLLTAILEARGVSVAVGTTHAPLSDSPIGVSSTSFPTPYTSSSS
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacacttctgggcacttccatgattcgggggtgggggacctggatgaagaccccaag
tgcccctgtccatcctctggggatgagcagcagcagcagcaacagcaacagccaccgccg
ccagcgccaccagcagccccccagcagcccccaggaccctcgttgcagcctcagcctcag
cctccgcagattcagcagcagcagcagcagccaccgcatcccctgtctcagctcgcccaa
ctccagagccagcttgtccaccccggcctgctgcactcccctcccactgctttcagggcc
cccacttcgtccaactccaccgccatcctccacccttcctccaggcaaggcagccagctc
aatctcaatgaccacttgcttggccactctccaagttccacagccacaagtgggcctgga
ggaggtagccggcaccggcaggccagccccctggtgcaccggcgggacagcaaccccttc
acggagatcgccatgagctcctgcaagtacagcggtggggtcatgaagcccctcagccgc
ctcagcgcctcccggaggaacctcattgaggccgagcctgagggccaacccctccagctc
ttcagccccagcaaccccccggagatcgtcatctcctcccgggaggacaatcatgcccac
cagaccctgctccatcaccccaacgctacccacaaccaccagcatgccggcaccactgcc
agcggcaccaccttccccaaagccaacaagaggaaaaaccaaaacattggctataagctg
ggacacaggagggccctgtttgaaaagagaaagcgactgagtgactatgctctgattttt
gggatgtttggaattgttgttatggtgatagagaccgagctgtcttggggtttgtactca
aaggattccatgttttcgttggccctgaaatgccttatcagtctatccaccatcatcctg
ctggggttgatcatcgcctatcacacacgggaagtccagctcttcgtgatcgacaatggc
gcggatgactggcggatagccatgacctacgagcgcatcctctacatcagcctggagatg
ttggtgtgcgccatccaccccatccccggcgaatacaaattcttctggaccgcgcgcctg
gccttctcctacacaccttcgcgggcggaggccgacgtggacattatcctgtccatcccc
atgttcctgcgcctgtacctgatcgcccgtgtcatgctgctgcacagcaagctcttcacc
gatgcctcttcccgcagcatcggggccctcaacaagatcaactttaacacccgctttgtc
atgaagaccctcatgaccatctgccccggcactgtgctgctggtgttcagtatctccctg
tggatcatcgcggcttggaccgttcgcgtctgcgaaaggtaccatgaccagcaggacgta
actagtaactttctgggtgccatgtggctcatctccatcacattcctttccattggttat
ggggacatggtgccccacacttactgtgggaaaggtgtctgtcttcttactggcatcatg
ggtgcaggctgcactgctctcgtggtggctgtggtggctcgaaagctggaactcaccaaa
gcagagaaacacgttcacaacttcatgatggatactcagctaaccaaacggatcaagaat
gctgcagccaatgtccttcgggaaacgtggctaatctataaacacacaaagctgctaaag
aagattgaccacgccaaagtcaggaaacaccagaggaaattcctccaagctatccaccaa
ctgaggagtgtcaagatggagcagagaaagctgagtgaccaagccaacaccctggtggac
ctttccaagatgcagaatgttatgtatgacttaatcacggaactcaatgatcggagcgaa
gacctggagaagcagattggcagcctggagtctaagctggagcatctcacagccagcttc
aattccctgcccctgctcatcgcagataccctgcgccagcagcagcagcagctcctgact
gccatcctggaggcccggggcgtcagcgtggcagtgggtaccacccacgccccactctcc
gacagcccaatcggggtcagctccacctccttcccaaccccgtacacaagttcaagcagt
tgctaa
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