Sciurus carolinensis (gray squirrel): 124988817
Help
Entry
124988817 CDS
T08117
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04136
Autophagy - other
ncar04140
Autophagy - animal
ncar04211
Longevity regulating pathway
ncar04213
Longevity regulating pathway - multiple species
ncar04216
Ferroptosis
ncar04621
NOD-like receptor signaling pathway
ncar04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124988817
04136 Autophagy - other
124988817
09143 Cell growth and death
04216 Ferroptosis
124988817
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124988817
04622 RIG-I-like receptor signaling pathway
124988817
09149 Aging
04211 Longevity regulating pathway
124988817
04213 Longevity regulating pathway - multiple species
124988817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124988817
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124988817
Membrane trafficking [BR:
ncar04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124988817
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124988817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Motif
Other DBs
NCBI-GeneID:
124988817
NCBI-ProteinID:
XP_047414548
EnsemblRapid:
ENSSCRG00010012997
LinkDB
All DBs
Position
7:56739197..56856577
Genome browser
AA seq
275 aa
AA seq
DB search
MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKVM
RQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDA
IEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEEN
GFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAIAPEDGERRNQVMI
HGIEPMLETPLQWLSEHLSYPDNFLHISIIPKQTD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgacaaagatgtactccgagatgtgtggtttggacgaattccaacctgcttc
actctgtatcaagatgagataactgaaagggaagcagaaccatactatttgcttttgcca
agagtaagttatttgacgttggtaactgacaaagtgaaaaagcattttcagaaggtgatg
agacaagaagacattagtgagatatggtttgaatatgaaggcacacccctgaaatggcat
tatccaattggtttgctatttgatcttcttgcatcaagttcagctcttccttggaacatc
acagtacattttaagagttttccagagaaagaccttctgcactgtccatctaaggatgca
attgaagctcattttatgtcttgtatgaaagaagctgatgctttaaagcataaaagtcaa
gtaatcaatgaaatgcagaaaaaagatcataagcagctttggatgggactacaaaatgac
agatttgaccagttttgggccattaatcggaaacttatggagtatcctgcggaagaaaat
ggatttcgttatatcccttttagaatatatcagacaacaactgagcgccctttcattcag
aaactgtttcgtcctgtggctgcagatggacagctacatacactgggtgatctcctcaaa
gaagtttgtccttctgcaattgctcctgaagatggggaaagaaggaatcaagtgatgatt
catggaattgagcctatgttggaaacacctctgcagtggctaagtgaacatctgagctat
ccagataattttcttcatattagcatcatccccaaacaaacagattga
DBGET
integrated database retrieval system