KEGG   Sciurus carolinensis (gray squirrel): 124988817
Entry
124988817         CDS       T08117                                 
Name
(RefSeq) autophagy protein 5 isoform X1
  KO
K08339  autophagy-related protein 5
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04136  Autophagy - other
ncar04140  Autophagy - animal
ncar04211  Longevity regulating pathway
ncar04213  Longevity regulating pathway - multiple species
ncar04216  Ferroptosis
ncar04621  NOD-like receptor signaling pathway
ncar04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124988817
   04136 Autophagy - other
    124988817
  09143 Cell growth and death
   04216 Ferroptosis
    124988817
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    124988817
   04622 RIG-I-like receptor signaling pathway
    124988817
  09149 Aging
   04211 Longevity regulating pathway
    124988817
   04213 Longevity regulating pathway - multiple species
    124988817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124988817
   03029 Mitochondrial biogenesis [BR:ncar03029]
    124988817
Membrane trafficking [BR:ncar04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    124988817
Mitochondrial biogenesis [BR:ncar03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    124988817
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF6782
Other DBs
NCBI-GeneID: 124988817
NCBI-ProteinID: XP_047414548
EnsemblRapid: ENSSCRG00010012997
LinkDB
Position
7:56739197..56856577
AA seq 275 aa
MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKVM
RQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDA
IEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEEN
GFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAIAPEDGERRNQVMI
HGIEPMLETPLQWLSEHLSYPDNFLHISIIPKQTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atgacagatgacaaagatgtactccgagatgtgtggtttggacgaattccaacctgcttc
actctgtatcaagatgagataactgaaagggaagcagaaccatactatttgcttttgcca
agagtaagttatttgacgttggtaactgacaaagtgaaaaagcattttcagaaggtgatg
agacaagaagacattagtgagatatggtttgaatatgaaggcacacccctgaaatggcat
tatccaattggtttgctatttgatcttcttgcatcaagttcagctcttccttggaacatc
acagtacattttaagagttttccagagaaagaccttctgcactgtccatctaaggatgca
attgaagctcattttatgtcttgtatgaaagaagctgatgctttaaagcataaaagtcaa
gtaatcaatgaaatgcagaaaaaagatcataagcagctttggatgggactacaaaatgac
agatttgaccagttttgggccattaatcggaaacttatggagtatcctgcggaagaaaat
ggatttcgttatatcccttttagaatatatcagacaacaactgagcgccctttcattcag
aaactgtttcgtcctgtggctgcagatggacagctacatacactgggtgatctcctcaaa
gaagtttgtccttctgcaattgctcctgaagatggggaaagaaggaatcaagtgatgatt
catggaattgagcctatgttggaaacacctctgcagtggctaagtgaacatctgagctat
ccagataattttcttcatattagcatcatccccaaacaaacagattga

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