Sciurus carolinensis (gray squirrel): 124988909
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Entry
124988909 CDS
T08117
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar05134
Legionellosis
ncar05140
Leishmaniasis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124988909
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
124988909
09174 Infectious disease: parasitic
05140 Leishmaniasis
124988909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124988909
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124988909
03012 Translation factors [BR:
ncar03012
]
124988909
04131 Membrane trafficking [BR:
ncar04131
]
124988909
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124988909
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124988909
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124988909
Translation factors [BR:
ncar03012
]
Eukaryotic type
Elongation factors
124988909
Membrane trafficking [BR:
ncar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
124988909
Exosome [BR:
ncar04147
]
Exosomal proteins
Proteins found in most exosomes
124988909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
124988909
NCBI-ProteinID:
XP_047414693
LinkDB
All DBs
Position
7:87028721..87032553
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGSASGTTLLEALDCILPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagactcatatcaacatcgttgtcatcggacacgtagattcgggcaag
tctaccactactggtcatctgatctacaaatgtggtgggatcgacaaaagaaccattgaa
aaatttgagaaggaagctgctgagatgggaaagggctcattcaagtatgcctgggtcttg
gataaactgaaagcggagcgtgagcgtggtatcaccattgacatctccctgtggaaattt
gagaccagcaagtattatgtgactatcattgatgctccaggacacagagacttcatcaaa
aatatgattacaggcacatctcaggctgactgtgctgtcctgattgttgctgctggtgtt
ggtgaatttgaagctggtatctccaagaatgggcagacccgtgagcatgcccttctggct
tacacactgggtgtgaaacaactaattgttggtgttaacaaaatggattccactgagcca
ccctacagtcagaagagatacgaggaaatcgttaaggaagtcagtacctacattaagaaa
attggctacaaccctgacacagtagcatttgtgccaatttctggttggaatggtgacaac
atgttggagccaagtgctaatatgccttggttcaagggatggaaagtcacccgtaaagat
ggcagtgccagtggaaccacactgcttgaagctttagattgcatcctgccaccaactcgt
ccaactgacaagcctttgcgtctgcccctccaggatgtctacaaaattggtggtattggt
actgtccctgtgggccgagtggagactggagttctcaagcctggcatggtggtcaccttt
gctccagtcaatgtcacaactgaagtaaagtctgttgaaatgcaccatgaagctctgagt
gaagctcttcctggagataatgtgggcttcaatgtcaagaacgtgtctgtcaaagatgtt
cgtcgtggcaatgttgctggtgacagcaaaaacgacccaccaatggaagcagctggtttc
actgctcaggtgattatcctgaaccatccaggccaaatcagtgctggctatgcccctgta
ctggattgtcacacagctcacattgcttgcaagtttgctgagctgaaagaaaagattgat
cgccgttctggtaagaagctggaagatggtcctaaattcttgaagtctggtgatgctgcc
atcgttgatatggttccaggaaagcccatgtgtgtcgagagcttctctgactatcctcct
ctgggtcgttttgctgttcgtgatatgaggcagacagttgctgtgggtgtcatcaaagca
gtggacaagaaggctgctggagctggcaaggtcaccaagtctgcccagaaagctcagaag
gctaaatga
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