Sciurus carolinensis (gray squirrel): 124988936
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Entry
124988936 CDS
T08117
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
124988936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124988936
03021 Transcription machinery [BR:
ncar03021
]
124988936
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124988936
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
124988936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
DIL
HOCHOB
Motif
Other DBs
NCBI-GeneID:
124988936
NCBI-ProteinID:
XP_047414729
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All DBs
Position
7:123560850..123565965
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AA seq
360 aa
AA seq
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MAGHLASDFAFSPPPGGGGDGPGGSEPGWIDPRTWLSFPGPPGGPGIGPGVGPGSEVWGI
PSCPPPYEFCGGVAYCGPQVGMGLVPHSGLETSQPESEVGAGVESNSEGASPEPCFAHPA
VVKVEKEKVEQNPEECQDIQALQKELEEFAKLLKQKRITLGYTQADVGLTLGVLFGKVFS
QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLLQARKRKRTSIENR
VRGNLENMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSIDYSQREDFEA
AASPFSGGPVSFPLAPGPHFGTPGYGGPHFTTLYSPVPFPEGEAFPSVSVTTLGSPMHSN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggccggacacctggcttcggactttgccttctcgccccctccgggtggtgggggcgat
gggccaggagggtcagagccgggctggattgaccctcggacctggctaagcttcccaggc
cctcccggtggtcctggaattgggccgggggttgggccaggttcggaggtgtgggggatt
ccctcatgccctccaccctatgagttctgcggaggggtggcatactgtggacctcaggtt
ggaatgggcctggtcccccacagtggcctggagacctctcagcctgagagcgaggtggga
gctggggtggagagcaactctgagggggcctcccccgagccctgctttgcccaccctgct
gtggtgaaagtggagaaggagaaggtggagcaaaaccctgaggagtgccaagatatccaa
gctctgcagaaagaactagaggaatttgccaagttgctgaagcagaagaggattaccctg
ggatatacccaggctgatgtggggctcaccctgggggttctgtttgggaaggtgttcagc
caaacgaccatctgccgctttgaggctctgcagctcagtttcaagaacatgtgcaagctg
cggcccctgctgcagaagtgggtggaggaagcagacaacaacgagaaccttcaggagata
tgcaaagcggagaccctcctgcaggcccggaagagaaagagaacgagtatcgagaaccga
gtgagaggcaacctggagaacatgttcctgcagtgccctaaacccacactgcagcagatc
agccacattgcccaacagttggggcttgagaaggacgtggtccgagtgtggttctgtaac
cggcgccagaagggcaagcgatcaagcattgactattcccaacgagaggattttgaggct
gcagcgtctcctttctcagggggacctgtatcctttcctctggccccagggccccatttt
ggtaccccaggttacggaggccctcatttcaccacactctactcaccagtcccttttcct
gagggggaagcctttccctctgtctctgtcaccactctgggctctcccatgcattcaaac
tga
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