Sciurus carolinensis (gray squirrel): 124988961
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Entry
124988961 CDS
T08117
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03010
Ribosome
ncar04120
Ubiquitin mediated proteolysis
ncar04137
Mitophagy - animal
ncar04140
Autophagy - animal
ncar05012
Parkinson disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05167
Kaposi sarcoma-associated herpesvirus infection
ncar05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
124988961
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124988961
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124988961
04137 Mitophagy - animal
124988961
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
124988961
05167 Kaposi sarcoma-associated herpesvirus infection
124988961
09164 Neurodegenerative disease
05012 Parkinson disease
124988961
05022 Pathways of neurodegeneration - multiple diseases
124988961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ncar03011
]
124988961
04121 Ubiquitin system [BR:
ncar04121
]
124988961
Ribosome [BR:
ncar03011
]
Ribosomal proteins
Eukaryotes
Large subunit
124988961
Archaea
124988961
Ubiquitin system [BR:
ncar04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
124988961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
TBK1_ULD
OTU1_UBXL
DUF2604
Dsc3_N
Ubiquitin_5
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
124988961
NCBI-ProteinID:
XP_047414769
EnsemblRapid:
ENSSCRG00010014205
LinkDB
All DBs
Position
7:complement(67259212..67259742)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQEKEGIPPDQQRLIFAGKQLEDGCTLSDYN
IQKESTLHLVLRLQGGIIEPSLCQLAQKYNCDKMICLKCYARLHPHAVNCRKKKCGHTNN
LHPKKKVK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgacgggcaagaccatcaccctcgaggtcgagcccagt
gacaccatcgagaatgtcaaagccaaaattcaagagaaagagggcatcccacctgatcag
cagcgtctgatttttgccggcaaacagctggaggatggctgcactctctcagattacaac
atccagaaagagtccaccctgcacttggtgcttcgcctgcaaggtggcatcattgagcct
tccctgtgccagcttgcccagaagtacaactgtgacaagatgatctgtctcaagtgttat
gcccgcctgcacccccatgctgtcaactgccgcaagaagaagtgtggccacaccaacaac
ctccaccctaagaagaaggtcaaataa
DBGET
integrated database retrieval system
