Sciurus carolinensis (gray squirrel): 124989071
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Entry
124989071 CDS
T08117
Name
(RefSeq) general transcription factor IIH subunit 5 isoform X1
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
ncar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124989071
09124 Replication and repair
03420 Nucleotide excision repair
124989071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124989071
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124989071
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124989071
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124989071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
DUF3458_C
Motif
Other DBs
NCBI-GeneID:
124989071
NCBI-ProteinID:
XP_047414954
LinkDB
All DBs
Position
7:complement(9437816..9448729)
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AA seq
96 aa
AA seq
DB search
MRLMLSVLLSFLLGLLRSSPSNWKKMVNVLKGVLIECDPAMKQFLLYLDESNALGKKFII
QDIDDTHVFVIAELVNVLQERVGELMDQNAFSLTQK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgatgctttcagtgttactttcttttttattaggattattgaggtcttcacct
tctaactggaaaaagatggtcaacgtcttgaaaggagtgcttatagaatgtgatcctgcc
atgaagcaatttctactatacttggatgagtccaatgccctggggaagaagttcatcatt
caagacatcgatgatactcatgtcttcgtaatagcagagttggttaatgtcctccaggag
cgcgtaggtgaattaatggaccaaaatgctttttctcttacccagaagtaa
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