Sciurus carolinensis (gray squirrel): 124989351
Help
Entry
124989351 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM31-like
KO
K12011
tripartite motif-containing protein 31 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124989351
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124989351
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124989351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
SPRY
zf-C3HC4_2
zf-RING_UBOX
PRY
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
Sina_RING
Baculo_IE-1
TRAF3_RING
zf-RING_6
RecR_ZnF
DUF2096_N
Motif
Other DBs
NCBI-GeneID:
124989351
NCBI-ProteinID:
XP_047415188
LinkDB
All DBs
Position
7:124865216..124875508
Genome browser
AA seq
565 aa
AA seq
DB search
MASQQFSGNLKEEVICPICMDFLQDPATIDCGHNFCHKCIARIAEDSGRFLKCPLCNSSV
KKTFRPNWLLVNLVKKIQAMGTSEEQPEGEELKCQKHGEKFYYFCEHDGDFLCVMCRESE
DHRMHNASLIEEAAQNYQAQIQCQVEILQQTEKEMVQMKEQGEWKINDFMNHVKFEMIKI
LGEFSHLQQVLEEEKNFLLSRLHWLGQEGDQQRKLFTASMKLQWTALKKLIDSLKVKQQM
LPSQLLEDIRATLHRSEEFQFLSPTLIPPHLEKKLSVAKSRHDSIIENMKKFEDNLQASG
KKDKNRFLESMNEKDKQNWDETIKPGLSNPYPLTPSHALFEASFPGEAAPSASLLAGSRE
TYVEVPVNRASSEDAGSFGSESSERFKAVLTPVALDAASPHPDLILSQDLKTVTLPLHPQ
RRSEEPADQERFYPFPCVLGSPGISSGCQAWEAELQGGERAGCLVGVASELVCRRGCLLV
EPLAGFWTLRITSLGCEALTDGGTRENLPIRPKKVGIFVDHELGEVVFFDSTTSNHIYTF
HASFAGQIFPFFQLLYPGTQITLNP
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggccagccaacagttttccggcaatctgaaggaggaagtgatctgccccatctgcatg
gactttctgcaggaccctgccaccattgactgtggacacaatttctgccacaaatgcatt
gcacggattgcggaagattcaggcagatttctcaaatgtcccctctgcaacagttctgtg
aaaaaaacattcaggcccaactggctgttggtgaatctggtgaagaaaatccaagctatg
ggtacctctgaggagcaaccagaaggggaagaactgaaatgtcagaagcatggagagaag
ttctattacttctgtgagcatgatggggatttcctctgtgtgatgtgtcgtgaatctgag
gaccaccgaatgcataatgccagcttgatagaagaagctgcccagaactatcaggcgcag
attcaatgtcaggttgagatcttgcagcaaacggagaaggagatggtacaaatgaaggag
caaggcgaatggaagatcaatgactttatgaaccatgtgaaatttgagatgataaagatc
ctgggggaattcagtcacctgcaacaggtcctagaagaggagaagaatttcctcctgtcc
cggctccattggctagggcaggagggagaccagcagaggaaactcttcactgcttcaatg
aagttgcaatggactgccctcaagaagctcatagattccctgaaggtcaagcagcaaatg
ctgcccagtcagctgctagaggacatcagagctaccctgcacaggagtgaagaatttcag
tttctcagtccaaccctgattcctccacacctggagaaaaaactcagtgtagcaaaatca
agacatgactccatcatagagaacatgaagaaattcgaagacaacctccaggccagtggg
aagaaagataaaaacagattcctcgaaagcatgaatgaaaaagacaagcagaactgggac
gaaacaattaagccggggctatcgaatccctacccgctaactccatcccacgccttattt
gaggcttcctttcctggagaagccgccccttcagcatcacttctggctggaagtagggag
acttacgttgaagttcctgtaaaccgagccagctctgaggacgcggggagctttggctct
gagagtagtgaacggttcaaggcggtgctgacccctgtagcactggacgcggcctcgccc
cacccagacctcatcctttctcaggatctaaaaacagtaacgctgcctctccaccctcag
cgcagatctgaagagccagcagaccaggagcgcttctaccctttcccttgcgtgctgggc
tctccaggcatttcttctggctgccaggcctgggaggcggagctccaaggaggagagcgc
gcgggctgtctggtgggcgtggcctcggagctagtatgccgacgaggttgtctgctggtg
gaacccttagcaggcttctggacgctacgcatcaccagcctcgggtgcgaggcgctcacc
gatggtggcacccgggagaatctacctatccgtccgaagaaagtgggcatcttcgtggac
cacgaactcggggaggtcgtcttcttcgacagcaccacaagcaaccacatctacaccttt
cacgcctccttcgctgggcagatcttcccctttttccagctcctgtatcctggcacacaa
atcaccctgaatccctag
DBGET
integrated database retrieval system
