Sciurus carolinensis (gray squirrel): 124989503
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Entry
124989503 CDS
T08117
Name
(RefSeq) lysosomal cobalamin transport escort protein LMBD1
KO
K14617
LMBR1 domain-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04977
Vitamin digestion and absorption
ncar04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
124989503
04980 Cobalamin transport and metabolism
124989503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124989503
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
124989503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Wbp11
TadE
Motif
Other DBs
NCBI-GeneID:
124989503
NCBI-ProteinID:
XP_047415287
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All DBs
Position
7:90465599..90561634
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AA seq
542 aa
AA seq
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MAAVTAGAASAELVIGWCIFGLLLLAILAFCWIYVRKYQSQRESEVVSTITAIFSLAIAL
ITSALLPVDIFLVSYMKNQNGTFKDWANANVSKQIEDTVLYGYYTLYSVILFCVFFWIPF
VYFYYEEKDDDDTGKCTQIKTALKYTLGFAVICALLLLVGAFVPLNVPNNKNSTEWEKVK
FLFEELGSSHGLAALSFSISSLTLIGMLAAITYTAYGMSALPLNLIKGTRSAAYERLENT
EDIEEVEQHIQTIKSKSKDGRPLPARDKRALKQFEERLRTLRKRERHLEFIENSWWTKFC
GALRPLKIIWGIFFILVALLFVISLFLSNLDKALHSAGIDSGFIIFGANLSNPLNMLLPV
LQTVFPLDYILITIIIMYFIFTSMAGIRNIGIWFFWIRLYKIRRGRTRPQALLFLCMILL
LIVLHTSYMIYSLAPQYVMYGSQNYLVESNVTSDDTKGNSTLSVPKRCDADAPEDQCTVT
RTYLFLHKFWFFSAAYYFGNWAFLGVFLIGLIVSCCKGKKSVIEGVDEDSDISDDEPSVY
SV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgactgctggcgcggcttcagccgagctggtgatcggctggtgcatattc
ggcctcttactactggctattttggcattttgctggatatatgttcgtaaataccaaagt
cagagagaaagtgaagttgtctccaccataacagcgattttttctctagcaattgcactt
atcacatcagcacttctaccagtggatatatttctggtttcttacatgaaaaatcaaaat
ggtacatttaaggactgggctaatgctaatgtcagcaaacagattgaggatactgtatta
tatggctactatacactatattctgttatattgttctgtgtattcttctggattcctttt
gtctacttctactatgaagaaaaggatgatgatgatactggtaaatgcactcaaattaaa
acagcactcaaatatactttgggatttgccgtgatttgtgcacttcttcttttggttggt
gcttttgtaccattgaatgttcccaataacaaaaattctacagagtgggaaaaagtgaag
ttcctatttgaagaacttggaagcagtcatggcttagctgcattgtcattttccattagt
tctctgaccttgattggaatgttggcagctataacttacacagcctatggcatgtcggca
ttaccattaaatttaataaaaggcactagaagtgctgcttacgaacgtttagaaaacact
gaagatattgaagaagtggagcaacatattcagacgatcaaatcaaaaagtaaagatggt
cgacctttgccagcaagggataaacgtgccttaaagcaatttgaagaaaggttacgaaca
cttaggaaaagagagaggcacttagaattcattgaaaacagctggtggacaaaattttgt
ggtgctctgcgtcccctgaagatcatatggggaatatttttcatcttagttgcattgctg
tttgtaatttctcttttcctgtcaaatttagataaagctcttcattcagctggaatagat
tctggcttcataatttttggagctaacctgagtaatccactgaatatgcttttgcctgta
ctacaaacagttttccctcttgattatattcttataacaattattattatgtactttatt
tttacttcaatggcaggaattagaaatattggcatatggttcttttggattagattatat
aaaatcagaagaggtagaaccaggcctcaagcacttttatttctttgtatgatacttctg
ctaattgttcttcatactagctacatgatttatagtcttgctccccagtatgttatgtat
ggaagtcaaaattacttggtagagagcaatgtaacttctgatgataccaaaggcaattca
actctttctgtgccaaagagatgtgatgcagacgcccctgaagatcagtgtactgttacc
cggacatacctatttcttcacaagttctggttctttagtgctgcatactattttggaaac
tgggcctttcttggggtattcttgattggattaattgtatcctgttgtaaagggaagaaa
tcagtcattgaaggagtagatgaagattcagacataagtgatgatgagccctctgtttat
tctgtttga
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