Sciurus carolinensis (gray squirrel): 124989578
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Entry
124989578 CDS
T08117
Name
(RefSeq) receptor-type tyrosine-protein phosphatase kappa isoform X1
KO
K06776
receptor-type tyrosine-protein phosphatase kappa [EC:
3.1.3.48
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124989578
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124989578
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124989578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
I-set
ig
Tc-R-P
Ig_3
Y_phosphatase3
Ig_2
PTPlike_phytase
Pur_ac_phosph_N
EphA2_TM
Ly49
PTP_tm
ECSCR
Protocadherin
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
124989578
NCBI-ProteinID:
XP_047415406
LinkDB
All DBs
Position
7:36221061..36768128
Genome browser
AA seq
1465 aa
AA seq
DB search
MDSAAAAAAALPAFVALLLLSPWPLLGSAQGQFSAGGCTFDDGPGACDYHQDLYDDFEWV
HVSAQEPHYLPPEMPQGSYMVVDSSDHDPGEKARLQLPTMKENDTHCIDFSYLLYSQKGL
NPGTLNILVRVNKGPLANPIWNVTGFTGREWLRAELAVSTFWPNEYQVIFEAEVSGGRSG
YIAIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDAVHNKLWLQRRNGEDI
PVAQTKNINHRRFAASFRLQEVTKTDQDLYRCVTQSERGSGVSNFAQLIVREPPRPIAPP
QLLGVGPTYLLIQLNANSIIGDGPIILKEVEYRMTSGSWTETHAVNAPTYKLWHLDPDTE
YEIRVLLTRPGEGGTGLPGPPLITRTKCAEPMRTPKTLKIAEIQARRIAVDWESLGYNIT
RCHTFNVTICYHYFRGHNESKADCLDMDPKAPQHVVNHLPPYTNVSLKMILTNPEGRKES
EETIIQTDEDVPGPVPVKSLQGTSFENKIFLNWKEPLDPNGIITQYEVSYSSIRSFDPAV
PVAGPPQTVSNLWNSTHHVFMHLHPGTTYQFFIRASTVKGFGPATAINVTTNISAPTLPD
YEGVDASLNETATTITVLLRPAQAKGAPISAYQIVVEELHPHRTKREAGAMECYQVPVTY
QNAMSGGAPYYFAAELPPGNLPEPAPFTVGDNRTYQGFWNPPLAPRKGYNIYFQAMSSVE
KETKTQCVRIATKAAATEEPEVIPDPAKQTDRVVKIAGISAGILVFILLLLVVVLIVKKS
KLAKKRKDAMGNTRQEMTHMVNAMDRSYADQSTLHAEDPLSITFMDQHNFSPRLPNDPLV
PTAVLVPITDENHSAATAESSRLLDVPRYLCEGTESPYQTGQLHPAIRVADLLQHINLMK
TSDSYGFKEEYESFFEGQSASWDVAKKDQNRAKNRYGNIIAYDHSRVILQPVEDDPSSDY
INANYIDIWLYRDGYQRPSHYIATQGPVHETVYDFWRMIWQEQSACIVMVTNLVEVGRVK
CYKYWPDDTEVYGDFKVTCVEMEPLAEYVVRTFTLERRGYNEIREVKQFHFTGWPDHGVP
YHATGLLSFIRRVKLSNPPSAGPIVVHCSAGAGRTGCYIVIDIMLDMAEREGVVDIYNCV
KALRSRRINMVQTEEQYIFIHDAILEACLCGETAIPVCEFKAAYFDMIRIDSQTNSSHLK
DEFQTLNSVTPRLQAEDCSIACLPRNHDKNRFMDMLPPDRCLPFLITIDGESSNYINAAL
MDSYRQPAAFIVTQYPLPNTVKDFWRLVYDYGCTSIVMLNEVDLSQGCPQYWPEEGMLRY
GPIQVECMSCSMDCDVINRIFRICNLTRPQEGYLMVQQFQYLGWASHREVPGSKRSFLKL
ILQVEKWQEECEEGEGRTIIHCLNGGGRSGMFCAIGIVVEMVKRQNVVDVFHAVKTLRNS
KPNMVEAPEQYRFCYDVALEYLETS
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggattcggcggcggcggcggcggcggcactgcctgcttttgtggcgctcttgctcctc
tccccttggcctctcctggggtcggcccaaggccagttctctgcaggtggctgtactttt
gatgatggtccaggggcctgtgattaccaccaggatctgtatgatgacttcgagtgggta
cacgttagtgctcaagagccccattatctgccacctgaaatgcctcaaggttcctacatg
gtagtggactcctcagatcatgaccctggagagaaagccagactgcagctgcccaccatg
aaggagaatgacactcactgcattgacttcagctacctgctctacagccagaaggggctg
aaccctggcactctgaacatactcgttagggtgaataaaggacctcttgctaatccaatt
tggaatgtgactggattcactggtagagagtggcttcgggctgagctagcagtgagcacc
ttttggccgaatgagtatcaggtaatatttgaagctgaagtttcaggagggagaagcggt
tatattgccattgatgacatccaagtactgagttatccttgtgataaatctcctcatttc
ctccgtctgggggatgtagaggtcaacgcagggcagaatgctacgtttcagtgtattgct
acagggagagatgctgtgcataacaagttatggctgcagagacgaaatggagaagatata
cctgtagcccagactaagaacatcaatcacagaagatttgctgcttcctttagattgcaa
gaagtgacaaaaactgatcaggatttgtatcgctgtgtaactcagtcagaacgaggttct
ggtgtgtccaattttgctcaacttattgtgagagaaccaccaagacccattgctcctccc
cagctgcttggcgttgggcctacctatttgctgattcaactgaatgccaactcaatcatt
ggagatggtcccattatcctgaaagaagtagaataccgaatgacatcaggctcctggaca
gaaacccatgcagtcaatgctccaacttataaattgtggcatttagatccagatactgaa
tatgagatccgcgtgctacttacgagacctggggaaggtggaacaggacttccaggacct
ccattaatcaccagaaccaaatgtgcagagcctatgcgaaccccaaagactctaaagatt
gctgagatacaagcgaggcgcattgctgtggactgggaatccttgggttacaacattact
cgctgccacactttcaatgtcactatctgctaccattattttcgtggtcacaatgagagc
aaggcagactgtttggacatggaccccaaagcccctcagcatgttgtgaaccatctgcca
ccttataccaacgtcagccttaagatgatcctaaccaatccagaaggaaggaaggagagt
gaggagacaattattcaaactgatgaagatgttcctggccccgtcccagtcaaatctctt
caaggaacatcctttgaaaacaaaatcttcttgaactggaaagaacctttggatccaaat
ggaatcatcactcaatatgaggtcagttacagcagcatacggtcatttgatcctgcagtt
ccagtggctggacctccccagacagtgtccaatttatggaacagcacacaccatgtcttt
atgcatctccaccctggaactacctatcagtttttcataagagccagcacagttaaaggc
tttgggccagcaactgccatcaacgtgaccaccaatatctcagctccaactttgccagac
tatgaaggagttgatgcatctctcaatgaaactgccaccacaataactgtattgttgaga
ccagcacaagccaaaggtgcacctatcagtgcttatcaaattgttgtggaggagctacac
ccacatcgaacgaagagagaagccggggccatggagtgctatcaggttcctgtcacctac
caaaatgccatgagtgggggagcaccctattactttgctgcagaattaccccctgggaat
ctacctgaacctgctccattcacagtaggtgacaatcggacctatcaaggcttctggaac
cctccactggctccacgaaaaggatacaacatctatttccaggcaatgagcagcgtggag
aaggaaactaaaacccagtgtgtacgaattgctacaaaagcagcagcaacagaagaacca
gaagtgatcccagatcctgccaagcagacagacagagtggtgaaaatcgcaggaattagt
gctggaatattggtgttcatcctcctcctcctagttgtcgtattgattgtaaaaaagagc
aaactggctaaaaagcgcaaagatgctatgggcaacacccggcaagagatgactcacatg
gtgaatgcaatggaccgaagctacgctgaccagagcactctgcatgcagaagatcctctt
tccatcaccttcatggaccaacataattttagtccaagattgcccaatgatccacttgtg
ccgactgctgtgttagtccctataactgatgagaaccacagcgctgctacagcagaatcc
agtcgccttctagacgtccctcgctacctttgtgaggggacggaatccccttaccagacg
ggacaactgcatccagccatcagggtagccgacctactgcaacacattaacctcatgaag
acatcagacagctacgggttcaaagaggaatatgagagtttttttgaaggtcaatcagca
tcttgggatgtagctaaaaaagatcaaaacagagcaaaaaaccgatatggaaacattata
gcatatgatcactccagagtaattttacaacctgttgaggatgacccttcttcagattac
atcaatgccaactatatagatatttggctgtacagggatggctaccagagaccaagccac
tacattgcaacccaaggcccagttcatgaaactgtgtatgatttctggagaatgatctgg
caagagcagtctgcctgcattgtgatggttacaaacttagttgaggttggccgggttaaa
tgctataaatattggcctgatgatactgaagtttatggtgacttcaaagtgacctgcgta
gaaatggaaccacttgctgaatatgtagttcggacattcaccctggaaaggaggggatac
aatgaaattcgtgaagttaaacagttccatttcacgggctggcctgaccatggagtgcca
taccacgctacagggcttctttccttcatccggagagttaagttatccaaccctccgagt
gcaggccccattgttgtgcactgcagtgctggggctggacgaactggctgctacattgtg
attgacatcatgctggacatggctgaaagagagggtgttgttgacatctataactgtgtc
aaagccttaagatctcgtcgtatcaatatggtccagacagaggaacagtatatttttatt
catgatgccattttagaagcctgcttatgtggagaaactgctatccctgtctgtgaattt
aaagctgcatattttgatatgattagaatagactcccagactaactcttcacatctcaaa
gatgaatttcagactctgaattcagtcacccctcgactacaagctgaagactgcagtata
gcatgcctgccaaggaaccatgacaagaaccgtttcatggacatgctgccacctgacaga
tgtctgccttttttaattacaattgatggggagagcagtaactacatcaatgctgctctt
atggatagctacaggcaaccagctgctttcattgtcacacaatacccactgccaaacact
gtgaaagacttctggagattagtgtatgattacggctgtacttccattgtgatgctaaat
gaagtcgacctgtcccagggctgcccgcagtactggccagaagaagggatgctacgatat
ggccctattcaagtggaatgtatgtcttgttcaatggattgtgatgtgatcaaccggata
tttaggatatgtaatttaacaagaccacaggaaggttatctgatggtacagcagtttcag
tatctaggatgggcttctcatcgagaagtgcctggctccaaacgatcatttttgaagctg
atcctgcaggtggaaaaatggcaggaagaatgtgaggagggggaaggccggaccatcatc
cactgcctaaatggtggtggtcgaagcggcatgttctgtgccataggcatcgttgttgaa
atggtgaaacggcaaaacgttgttgatgttttccacgcagtaaagacactgaggaacagc
aagccaaacatggtggaagccccggaacagtaccgtttctgctatgatgtagctttggag
tacctggaaacatcttag
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