Sciurus carolinensis (gray squirrel): 124989599
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Entry
124989599 CDS
T08117
Name
(RefSeq) tripartite motif-containing protein 15-like
KO
K12005
tripartite motif-containing protein 15
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124989599
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124989599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-RING_2
DUF3584
zf-C3HC4_3
DUF7605
Apolipoprotein
DUF4618
Fib_alpha
Exonuc_VII_L
DUF745
DUF2203
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
124989599
NCBI-ProteinID:
XP_047415449
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All DBs
Position
7:complement(124795142..124801850)
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AA seq
466 aa
AA seq
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MPSNPSLQVVHEGATCPACAGPLQDAVTAACGHTFCSLCLSACAQMGAQPSGRVLLCPLC
QEEEEQTETFMDPVPLGPVGETYCQEHGEKIYFFCKNDSEFLCVFCREGPSHQAHTVGVL
EEAIQPYRDRLKSRLESLSTERDKIEDIKCREDQKLHMLLTQIENKKQQVETTFKRLQQE
LEDQRHLLLARLRELEQQVWKERDEYVTKVSEEVTRLGVQVKELEEKCQQPASELLQDVR
VNQSRCEMKTFVSPEAISSDLVKKIRDIHRKILALPEMMKKFSENLVHHLETDSVDVTLD
PQTASASLVLSEDRKSVRYTRKKRNLPDSPLRFDGLPVVLGCPGFCSGLHHWQVEVQLGD
GGGCTVGVAAEEVRRKGEMGLSAQEGVWAVIISHQQCWASTSPGTDLPLSDIPHCVDVTL
DYEAGRVTLLDADTQVPIFTFTASFSGRVFPFFAVWKKGSCLTLKG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgccttccaacccctccctgcaggtggtccatgagggggctacctgtcccgcctgtgcc
gggccccttcaggatgcagtgaccgccgcctgtggacacaccttctgcagcctctgcctc
tctgcgtgtgcccaaatgggggcccagccctccggcagagtcctgctctgcccgctgtgc
caggaggaggaggagcagacagagaccttcatggaccctgtgcctctgggccctgtgggg
gagacatactgccaggagcatggtgagaagatctacttcttctgcaagaacgattcagag
ttcctctgtgtgttctgccgggagggtccctcccaccaggcccacactgtgggggtcctc
gaggaggccattcagccctacagggatcgtctcaaaagtcgtctggaatctctgagcaca
gaaagggacaagattgaagacataaagtgtagagaagatcagaagctccacatgcttctg
actcagattgaaaacaagaaacaacaagtagaaacaactttcaagagactacagcaggag
ctggaggaccagcggcatctcctgctggccaggttgagggagctagagcagcaggtctgg
aaggagagagatgagtacgtcacaaaggtctctgaggaggtcacccggcttggagtccag
gtcaaggagctggaggagaagtgtcagcagccagcaagtgagcttctacaagatgtcaga
gtcaaccagagcaggtgtgagatgaagacttttgtgagtccagaggccatttcttctgat
cttgtcaagaagattcgtgacattcacaggaaaatacttgccctcccagagatgatgaag
aaattttcagaaaacttggtgcatcatctggagacagattcagtggacgtcactctggac
cctcagaccgccagtgcaagcctggtcctctcagaggacagaaagtcagtgaggtatacg
cggaagaagcggaacctgccggatagccccctgcgcttcgatggtttgccggtggtgctg
ggctgtcccggcttctgctcgggactccaccactggcaggtggaagtgcagctgggcgac
ggaggcggctgcacagtgggggtggccgccgaagaagtgagaagaaaaggggagatgggt
ctgagcgcccaggagggcgtctgggccgtgatcatctcgcaccagcagtgctgggccagc
acttccccggggaccgacctgccgctgagcgacatccctcactgcgtggacgtcaccctg
gactatgaggcggggcgcgtgaccctcctagacgcagacacccaggtgcccatcttcacc
ttcactgcctctttctctggcagagtctttcctttctttgccgtctggaagaaaggttcc
tgcctgactttgaaaggatga
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