Sciurus carolinensis (gray squirrel): 124989634 Help Entry 124989634         CDS       T08117                                  Name (RefSeq) afadin isoform X1   KO K05702   afadin Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04014   Ras signaling pathway ncar04015   Rap1 signaling pathway ncar04024   cAMP signaling pathway ncar04520   Adherens junction ncar04530   Tight junction ncar04670   Leukocyte transendothelial migration Brite KEGG Orthology (KO) [BR:ncar00001]  09130 Environmental Information Processing   09132 Signal transduction    04014 Ras signaling pathway     124989634    04015 Rap1 signaling pathway     124989634    04024 cAMP signaling pathway     124989634  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     124989634    04530 Tight junction     124989634  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     124989634 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RA DIL PDZ FHA PDZ_6 RA_2 RA_3 PDZ_2 RASSF8-10_RA Yop-YscD_cpl Motif Other DBs NCBI-GeneID:  124989634 NCBI-ProteinID:  XP_047415494 LinkDB All DBs Position 7:complement(1914152..2046974) Genome browser AA seq 1922 aa AA seqDB search MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDTDEKPLVVQLNWNK DDREGRFVLKNENDAAPAKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ TSDKEDGPSRGDDSENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKEYCIAQ VMLPPGAQHSDERGAKEIILDDDECPLQIFREWPSDKGILVFQLKRRPSDYIPKKAKKHA EGKPLKGKERVDGSGYGSALPPEKLPYLVELSPAPGRRSHFAYYSCHTYEDGSDSRDKPK LYRLQLSVTEVGTERLDDSSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQRI SETTMLQSGMKVQFGVSHVFKFVDPSQDHALAKRSVDGGLMVKGPRHKPGTVQETTFDLG GDVHSGTALPTSRSTTRLDSDRVSSTSSTAERGMVKPMIRVDQQQDYRRQESRTQDASGP ELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRHVLSSQHRPDVSPT ERTHKVIAVVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSR ITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAM SLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWA EKQGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPD EPFIPTDLIDNVVAVAENTADELARSDGRDVQLEEDPDLQLPFLLPEDGYSCDVVRNIPN GLQEFLDPLCQRGFCRLIPHARSPGTWTIHFEGADYESHFLRENTELAQPLRKEPEIITV TLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLS QERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFE LYNNSAQNGSPESPQLPWAEYSEPKKLPDDRLMKNRADHRSSPNVANQPPSPGGKSPYSS GTTAKITSVSTGNLCAEEQSPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPSQTQWPE YEEKPHMHADSNHSSVAIQRIARSQEELREEKAYQLERHQVEAVMDRKSDSDLWVNQSSS VESSTSSQEHLNHSSKSATPASTLTKSGPGRWKTPAAVLPTPVAISQPIRTELPPPPPPP PVHYAGDFDGIPMDLPLPPPPANQVVPQSAQAAAERKKREEHQRWYEKEKARLEEERERK RREQERKLGQMRTPPLHPAPFPPLATPQSKPEKPSTLQRPQETVIRELQPQQQPRTIERR DLQYITISKEELSSGDSLSPDPWKRDAREKLEKQQQMHIVDMLSKEIHELQNKADRTAEE SDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTAVPAISV LDLLQDEERRRQQQLEEMRRREAEDRVRQEEERRLEEERAKRDAEEKRRQEEGYYSRLEA ERRRQHEEAARRLLEPEEPGLCRPPLPRDYEPPSPSPVPSTPPPPPQRNASYLKTQVLSP DSLFTAKFVSYNEEEEEEEDCSLAGQDKYSSVRKSHGHLPPAALQPQQPPCKPRPASFGI FLSNSSQPPSAKANSTAHKTVQPPPPPNKPSFCHPGHCKGRGEGPHPYAASAGAVSGALD APQDGREKHTRSQDADLPGSSGAPENLTFRERQRLFSQGQDVSNKVKASRKLTELENELN TK NT seq 5769 nt NT seq  +upstreamnt  +downstreamnt atgtcggcgggcggccgcgacgaggagcggcggaagctggccgacatcatccaccactgg aacgccaaccggctggacctgttcgagatcagccagccgaccgaggatctggagttccat ggtgtgatgagattttattttcaagataaagctgctggaaactttgccacaaaatgcatc cgtgtctctagcactgctaccacccaagatgtgattgaaactctggcagagaaattccgc cccgacatgcgcatgctgtcgtctcccaagtattcactgtatgaagtgcacgtcagcgga gaagaaagaagattggacactgatgagaagcctctagttgtgcagttgaattggaacaaa gatgaccgggaaggcagattcgtgctcaagaatgagaacgacgcggcccctgccaagaag gctcaaagtaatggaccagaaaagcaggagaaagaaggtgtcatccagaacttcaagaga actctctcaaagaaagagaagaaggaaaaaaagaagagagagaaggaggccttgagacag acatctgataaggaggacggaccttcccgaggggatgacagtgagaattcccgactggct gctgaggtttacaaggacatgccagaaaccagctttacacgaaccatttctaatcccgag gtggtcatgaagcgacggcggcagcagaagctggagaagaggatgcaggagtttcgcagc tctgacgggcggcccgactcaggtggaacattgagaatttatgcagatagtttaaagcca aacattccttataagacaatcctgctgtctactacggatcctgcagactttgctgtggct gaagctttagagaagtatggtctggagaaggagaatcccaaggaatactgcattgctcag gttatgcttcctcctggagcccagcattctgatgaaagaggtgctaaagaaatcattctt gatgacgatgagtgtcctttgcagatcttcagggaatggccaagtgacaaagggatttta gtctttcagttgaagaggaggccgtcggactacatcccaaagaaagcaaagaagcacgca gaagggaagccgctgaaggggaaggagagagtggatggctcaggctacggctctgctctc ccccctgagaagctgccctacttagtggagttaagcccagccccagggagaaggagtcac tttgcctactacagctgtcacacttacgaagatggctctgactccagagacaagccaaag ctttaccgccttcagctgagtgtgactgaagttgggacagaaaggttggacgacagctcc atccagctctttggcccaggaatccagccccatcactgtgacctcaccaacatggacgga gtggttaccgtgacacccagaagtatggatgcagagacctatgtggatggccagcgcatc tcggagaccaccatgctgcagagtggcatgaaagtgcagtttggggtgtcgcatgtgttc aagtttgtggaccccagccaggaccacgctcttgccaagagatctgtggatggaggcctg atggtgaagggcccaagacataagcctgggactgttcaggaaacaaccttcgatctggga ggagatgtccacagtgggacagcactgccgacgagcaggagcaccaccagactggacagc gacagggtatcctcgacctccagcaccgctgaacgagggatggtgaagcccatgatccga gtggatcagcagcaggattaccgcaggcaggagagcagaactcaggatgcttctgggccg gaactgatactgcctgcaagcattgaattcagggaaagttcggaagattcctttctatct gccatcatcaattacactaatagctctacagtgcattttaagttgtcccctacatatgtg ctgtacatggcctgtcggcatgtgctgtccagccagcacaggccagatgtcagtcctaca gagcgcacgcacaaggtcattgccgtggtcaacaagatggtgagcatgatggagggggtg atccaggaggtagaccaggttgatcagaagcagaagaacatcgcaggggcacttgccttc tggatggccaacgcctccgagctgctcaacttcatcaagcaggaccgagacctcagtcgg atcacgctcgatgcccaggacgttctcgcgcatctggttcagatggcatttaaatacctg gtccactgtcttcagtcagaactgaataactacatgcccgcctttctggatgatcctgaa gagaacagtctgcaaagaccaaaaatagatgacgtgctgcacacgctcacgggagccatg tccttgctgcggcgctgcagagtcaatgctgctctgaccatccagcttttctctcagctg ttccacttcatcaatatgtggctgttcaacagattggtgacagacccagactcaggactg tgctcccactattggggagcaatcatccgccaacagttgggacatatcgaagcctgggca gagaaacagggtctggaactggctgcggactgtcacttgagcaggatcgtgcaggcaacc actttgcttaccatggataaatatgcacctgatgacattccaaatataaacagcacctgc tttaagttaaattcactgcagcttcaagccttactacaaaattatcactgtgcacccgat gagccttttatccctacggatctcatagacaatgtggtggctgtggctgagaacacggct gatgagctagcccgcagcgacgggagggacgtacagttggaggaggaccctgacctgcag ctgcctttcctcttgccagaagatggctattcctgtgatgtcgtcagaaacattccaaac ggtttacaggagtttttagaccctctgtgccagagagggttttgcaggctgattcctcac gcgcgctcaccaggcacttggacaatacattttgaaggtgcggattatgagagccacttt ctgcgtgagaacacagaactggcccagcctctgaggaaggagcctgaaataatcactgtg accctaaagaagcagaatggaatgggcctcagcattgtggcagcaaagggtgccggccag gataaactgggcatctatgtcaagtctgtcgtgaaaggaggcgctgcagatgtggatgga cgactagctgcaggagaccagctcctcagtgtggatgggcgcagcctggtgggactctct caggaaagggcagcagaactcatgacaagaacgagttccgtggttacactcgaggtagca aagcaaggtgccatctatcacggcctggccaccctcctcaaccagccatcccccatgatg cagagaatttcagatcgacgtggctcgggaaaacctcgaccaaagagtgaaggttttgag ctctataataattcagctcaaaatgggtcgccagaaagtcctcagctgccctgggcagag tacagtgaaccaaagaaattgccagatgacagactgatgaaaaacagagctgatcatcgc tctagccccaatgtggcaaatcagccacctagtcctggagggaagagcccatattcctct ggaacaacagccaagataacctctgtctccacggggaatctctgcgctgaggaacagagc cctccacccagacctgaagcctaccccatcccaacccagacatacaccagagagtatttc accttcccagcctccaaatcccaggatcgcatggctccttctcagacccagtggccagag tatgaggagaagccccacatgcatgcagacagcaaccattccagtgttgccattcagcgc attgcccgttcccaagaagagcttcgagaagagaaggcttaccagctagagcggcaccag gtggaggcagttatggatcggaagtctgatagcgacttgtgggtcaatcagagctcctca gtggaatccagcacctccagccaagaacacctgaaccattcctccaagtcggccacccct gcttccacgctgaccaaaagtggccctggccgttggaaaaccccagcagcagtgctgccc accccagtggccatctcccagcccatcagaacagagctgcctccacctccgcctccgcct cctgtccactacgctggagactttgacgggattccaatggatttgcctctcccaccccct ccagccaaccaggtggttccacagtctgctcaggcagctgcagaacggaagaagagggag gagcaccagaggtggtatgagaaagagaaggctcgcctggaggaggagcgtgagaggaag cgcagggagcaggagaggaagctgggccagatgcgcacgccacccctgcaccccgctccc ttccctcccctggccacaccacagtcgaagcctgagaagccgtccacactccagaggccc caggaaacagttattcgagaactgcagccccagcagcagccccgtaccatcgagcgcaga gacttgcagtatatcaccatcagcaaagaggagctttcttctggggacagcctgtctcca gacccttggaagcgggatgccagggagaagctggagaagcagcagcagatgcacatcgtg gacatgctgagcaaggagatccacgagctgcagaacaaggcagaccgcaccgcggaggag agtgaccgcctgcggaagctcatgctggaatggcagttccagaagagactccaggagtcc aagcagaaggatgaggacgacgaggaggaggaagacgacgacgtggacaccatgctgatc atgcagcgcctagaggctgagcggagagccaggcagactgctgtgccagcaatctctgtt ctagatttgttgcaggatgaggagcgcagacgccagcagcagttggaggagatgcgccgg cgggaagcagaagaccgagtgagacaggaggaggagcggcgtctggaggaggagcgagcc aagcgggacgccgaagaaaagaggcgacaggaagaagggtattacagccgcctggaggcc gagaggcgcagacagcacgaggaggcggcgcgcaggttgctggagcccgaggagcccggg ctgtgccgacctccgcttccacgggactacgagcccccgtccccatcccctgtgcccagc acccctcctcccccacctcagcgaaacgcctcctacctcaaaacacaggtcctctcccca gactcgctgttcactgccaagtttgtttcgtacaatgaggaggaggaggaggaggaggac tgcagcctagcaggtcaggataagtactccagcgtgaggaagtctcatgggcaccttcct cctgctgccctgcagccgcagcagcccccctgcaagccacgcccggcctcctttggcatc tttctctccaactcatcccagccaccctcggccaaagccaacagtactgcccacaaaaca gtacagcccccaccccctccaaacaaaccaagcttctgccatcccggccactgtaaaggt agaggtgaaggaccacacccttacgcggcgtctgctggggcagtcagcggtgcccttgat gctcctcaggacgggagagagaaacacaccagaagccaagatgcagacttacctgggagt tctggagcccctgaaaacctgaccttcagagagcgtcagcgccttttttcacaaggtcaa gatgtgtccaacaaggtgaaagcttcccgtaaattgacagaactggagaatgaactaaac accaagtga

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