Sciurus carolinensis (gray squirrel): 124989661
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Entry
124989661 CDS
T08117
Name
(RefSeq) ribonuclease P protein subunit p40 isoform X1
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124989661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124989661
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124989661
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124989661
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
124989661
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
124989661
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
124989661
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
124989661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuc_P_40
DUF3549
Motif
Other DBs
NCBI-GeneID:
124989661
NCBI-ProteinID:
XP_047415562
EnsemblRapid:
ENSSCRG00010007328
LinkDB
All DBs
Position
7:complement(136469031..136477977)
Genome browser
AA seq
363 aa
AA seq
DB search
MATLRRLREAPRHLLVCEKSNFNHDKSRHRHLVETHYHNYRVSFLIPECGVLSKELKNLV
METGPYYLVRNLPVHELITQEFINTFVKKGSCYALTYNTNIDEDNTVALLPNGKLILSLD
KDTYEETGLQGHPSQYSGRKIMKFIVSIDLMDLSFNLNSKKYGRICWSFKEKKPLKFDFL
LAWHHTGAEEPAMLSFFSKYQIQEHQPKVSMSTLRDLQCPVLQSGELRGKPEASCSALEL
LDWLGGVFCNADQNNEPDNFISNYCCPRPSTVVAKAHLCTITGFILPEKISVLLEQLCHY
FDEPKLAPWVTLSVQGFADSPVSWRENEHGFRKGGEHLYNFVIFNNQDYWLQMAVGANDD
CPP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctgcgcagactgcgagaagcgccccggcacttactggtctgcgagaaatcc
aacttcaaccacgacaagtcgcgccaccggcacctcgtggagacgcactatcataactac
agggtttcatttctcattcctgaatgtggagtgctatcaaaagaactgaaaaacctggtc
atggaaactggaccctattaccttgtgaggaatttacctgttcatgaattaatcacacag
gaattcatcaacacttttgtaaagaaaggttcgtgctatgcactaacatacaatacaaat
attgatgaagataatactgttgccctgcttccaaatgggaaattaattttgtcactggat
aaagacacttatgaagaaactggacttcagggtcatccatctcagtattctggcagaaaa
atcatgaaatttattgtttccattgatttgatggatttatcctttaacctgaattctaag
aagtatggaagaatatgttggtccttcaaagaaaagaagccattgaaatttgattttctt
ttggcttggcatcatacaggtgcagaagaaccagcgatgttgtcattcttttccaaatac
caaattcaggagcatcaaccaaaagtgtcaatgagcacattgagagatctacagtgccca
gtgctacagagtggtgagctcaggggaaagcccgaggcgtcctgcagtgccctggaactc
ttggactggcttggcggtgtcttctgtaatgcagaccaaaataacgagcctgataatttc
atatcaaactattgctgtccccggccaagcacagtggtggccaaagctcatttgtgtaca
atcactggtttcatacttccagagaagatctctgtcctcctggaacagctgtgtcactac
tttgatgaaccaaagttagctccatgggttacattgtcagtccaaggctttgcagacagt
cctgtttcgtggagagaaaatgaacatggttttcggaaaggaggagaacatttatacaac
tttgtgatttttaataatcaggactattggcttcagatggctgttggggcaaatgatgat
tgtccaccataa
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